Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1295 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGCAGCGGCCCTCCGGCCAGCCAATATACTGCACCATCTAGAGGAGGTGGTACATATGGCGGAGGAGGAGGCAATGACAGAGCAGAACCAAGGAGCAATGTTGTCAAAAGTGGTGGCCCACAGAAAGTATTACCAATTGAAATACCTGCTATGCCATTGGATGAGTTGAATAGTTTAACAGGAAACTTTGGTACTAAGGCTTTCATTGGAGAAGGTTCCTATGGAAGAGTTTTCTATGCAAAATTGAGTAATGGTACTGATGCTGCAATCAAGAAGCTCGATAATTCTTCCCCGGAACCCGATGACGATTTTGCTAATCAGCTATCAGTTGTTTCAAGACTGAAACATGAAAATTTTGTGGAGTTGTTTGGATATTGCCTTGAGGCAAACAACAGAATTTTGGTTTATCAATATGCAAGTATGGGATCTTTGCATGACGTGTTACACGGATTCGTTTGCGAGTTGGGTTTTGAAGGGAAAAAGAAGGCGTTAGAGTATCTCACAAGAAGGAAGGGTGTACAAGGTGCTGAACCTGGTCCTGTTTTAAGCTGGAACCAAAGAGCAAAAGTTGCATTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAAAAGGCTCAACCTTCTATAGTTCATCGCGATGTTAGATCGAGCAATGTCTTGTTGTTCAATGATTATGAGGCCAAGATTGCTGATTTTAGCCTCACAAATCAGTCTTCTGATACAGCAGCTAGGCTACACTCAACAAGAGTCTTAGGAACATTTGGTTATCATGCTCCAGAGTATGCCATGACTGGGCAAATAACCCAGAAAAGTGATGTATACAGTTTTGGTGTTGTACTTTTAGAACTCTTAACAGGAAGAAAACCAGTAGATCACACAATGCCCAAAGGGCAACAAAGTCTTGTAACTTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGTTAAACAATGACTACCCTCCAAAGGCAATTGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAATATGAAGCTGATTTCCGACCAAATATGACCATTGTTGTGAAAGCTCTTCAACCACTTCTCAATGCAAAACCTCCAGGTCCTGACTCCAATGCTTGA 1155 0.4277 MLCCGGAEEESSGPPASQYTAPSRGGGTYGGGGGNDRAEPRSNVVKSGGPQKVLPIEIPAMPLDELNSLTGNFGTKAFIGEGSYGRVFYAKLSNGTDAAIKKLDNSSPEPDDDFANQLSVVSRLKHENFVELFGYCLEANNRILVYQYASMGSLHDVLHGFVCELGFEGKKKALEYLTRRKGVQGAEPGPVLSWNQRAKVAFGAAKGLEFLHEKAQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPPGPDSNA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1295 384 ProSitePatterns Tyrosine protein kinases specific active-site signature. 219 231 IPR008266 GO:0004672|GO:0006468
Lal3g1295 384 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Lal3g1295 384 ProSiteProfiles Protein kinase domain profile. 73 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1295 384 Gene3D Transferase(Phosphotransferase) domain 1 152 377 - -
Lal3g1295 384 MobiDBLite consensus disorder prediction 1 50 - -
Lal3g1295 384 Pfam Protein tyrosine and serine/threonine kinase 77 369 IPR001245 GO:0004672|GO:0006468
Lal3g1295 384 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 383 - -
Lal3g1295 384 SMART tyrkin_6 73 369 IPR020635 GO:0004713|GO:0006468
Lal3g1295 384 PANTHER OS03G0226300 PROTEIN 1 383 - -
Lal3g1295 384 SUPERFAMILY Protein kinase-like (PK-like) 52 369 IPR011009 -
Lal3g1295 384 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1295 Lal-Chr3 18709929 18714003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1295 37 376 Receptor kinase-like Gene Family AT3G58690 40.988 1.75e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lal3g1295 PK_Tyr_Ser-Thr 7.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1295 - - gmx:100786291 647.891