Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1277 CAAAACAATAGCAACACAGACGAACAACTTGATTATAGATATGCTTGTTTAGACCAATCTTCAATTCCACCTTCTAGTACATACCAAACCAACCTCAACAATTTGATTTTTTCACTCTCATTTGATTCTGCTTCTAGCAATGGTTTTGGTAATAGAACTTCAGGTAATGATGATAAAGGGTATATGGTTTATGGTCTCTACCTTTGTCGCGGCGATGTGAACACTAGCCTTTGTCATCAATGTGTACAAAATTCTAGCTTTTTACTAAAGCAGCATTGCCCAAATAATGCCTCAGCTATTTTGTGGTACCCCTTTTGTCTATTGAGGTACTCGAACCAGAATTTCTTCGGCAAACTCGCTGTAACGCCGAGGATTCCTATGTTAGATGCTAAGCAAAATTTCACTAGTGCTGGAGAGTTCGATAGTGATGCTAGAGTTTTGATGAATGGTTTGATCCAAATGGGATCGGGAGCACCGTTGATGTTCGGGACGCATATGTTTAACATAAATGGTACTCAGAGAAGGTATGGTTGGGTGCAGTGCAGCAGGGATATTACTAGTAGTGAGGAATGCAGAACATGTTTGAGCAATTTGCTCGACGATGTTCGAGATTGCTGCGAGAGGAAGAGGGTGTGGCGTGTCTTTTCTCCAAGTTGTATTATGATGTATGAAACACAACCATTCCTTTTGAATGATAATATACTACAAGATAAAGGGGGTAACAGAAGGTTCAGGATTACGAAACAGAAAAAGGGTTCATCTATGCAAGAAAATGGACTAAGTCCAATGTTTTCTGAAGATGAAACTCACAAGGAGGAGACTATGAATGGTGACCTTCCTATGATGCCTCTGAGTACTATTATACAAAGCACAAATAGTTTTTATGATGAATATAAATTAGGGAAAGGTGGATTTGGCCCTGTCTACAAGTCTCTCAACGCTCCCGGGAACGTAGGTGTGGAGGAATTCAAGAATGAAGTAATATTGATTGCAAAATTGCAGCATAGAAACCTTGTGAGAATGTTGGCTTGCTGCATTGAGCAGAATGAAAAGCTACTTATTTATGAATACATGCCCAATTCTAGTCTTGATTTTCACCTATTTGATATGGTGAAGGGTGCACAGCTAGACTGGAAAAAAATATTAAACATTATTAATGGTATTGCTAAAGGGATTCTATATCTTCATGAAGACTCTAGACTAAGGGTTATTCACAGAGACCTAAAAGGTAACAATATTCTGTTAGATCGTGAAATGAATCCAAAAATATCAGACTTTGGATTGGCTAGAACATTCGTAGAAGACCAGAACCATGCAAATACTATTTGA 1329 0.3845 QNNSNTDEQLDYRYACLDQSSIPPSSTYQTNLNNLIFSLSFDSASSNGFGNRTSGNDDKGYMVYGLYLCRGDVNTSLCHQCVQNSSFLLKQHCPNNASAILWYPFCLLRYSNQNFFGKLAVTPRIPMLDAKQNFTSAGEFDSDARVLMNGLIQMGSGAPLMFGTHMFNINGTQRRYGWVQCSRDITSSEECRTCLSNLLDDVRDCCERKRVWRVFSPSCIMMYETQPFLLNDNILQDKGGNRRFRITKQKKGSSMQENGLSPMFSEDETHKEETMNGDLPMMPLSTIIQSTNSFYDEYKLGKGGFGPVYKSLNAPGNVGVEEFKNEVILIAKLQHRNLVRMLACCIEQNEKLLIYEYMPNSSLDFHLFDMVKGAQLDWKKILNIINGIAKGILYLHEDSRLRVIHRDLKGNNILLDREMNPKISDFGLARTFVEDQNHANTI 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1277 442 ProSiteProfiles Gnk2-homologous domain profile. 122 228 IPR002902 -
Lal3g1277 442 Pfam Protein tyrosine and serine/threonine kinase 320 438 IPR001245 GO:0004672|GO:0006468
Lal3g1277 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Lal3g1277 442 Gene3D - 126 228 IPR038408 -
Lal3g1277 442 Gene3D - 9 115 IPR038408 -
Lal3g1277 442 Pfam Salt stress response/antifungal 132 225 IPR002902 -
Lal3g1277 442 Pfam Salt stress response/antifungal 21 113 IPR002902 -
Lal3g1277 442 SMART serkin_6 294 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1277 442 ProSiteProfiles Gnk2-homologous domain profile. 10 115 IPR002902 -
Lal3g1277 442 SUPERFAMILY Protein kinase-like (PK-like) 276 438 IPR011009 -
Lal3g1277 442 Gene3D Phosphorylase Kinase; domain 1 255 357 - -
Lal3g1277 442 ProSiteProfiles Protein kinase domain profile. 294 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1277 442 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 23 249 - -
Lal3g1277 442 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 269 441 - -
Lal3g1277 442 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 249 - -
Lal3g1277 442 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 269 441 - -
Lal3g1277 442 Gene3D Transferase(Phosphotransferase) domain 1 358 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1277 Lal-Chr3 18532184 18535098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1277 14 441 Receptor kinase-like Gene Family AT4G05200 36.929 2.91e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal3g1277 PK_Tyr_Ser-Thr 2.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1277 - - gmx:100798691 686.026