Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1265 ATGGAATCTAATAGGCCACTTTTGTTACAATCTCCAAGAACTCCAAATACACAAGAGTTTGTTCATGCTATTCATGTTTTTCCTGAATTACCTAAATCAAAGTCAAGTTCTAGCAACACTGTCACTTTTGCTGGAATGGATTCAAGCAACCCAATTGAGAATCCTTCAAATTCTGAAGCCTTATGGAGCCTGAAGAATTCGGCTTCGCGGAGAAGTAATACATCGGTTCACTCCGGGAGTTCTGGTAGTACTAAGAGCTCTGTGAAGGAAGTGAACCGTTCCGGGTCGAAGTCTGTGAGGTATGGCTCAAAGGGTGCTGATTCTGATGGACTAAGCATGTCTCAGAAGGAACTAAGTGATGATGATGCAAGATTGGTTTATGTAAATGATCCTGAGAGGACTAATGAGAGGTTCGAATTTTCGGGAAATTCGATTCGTACGGCTAAATACTCGATCCTCACTTTCATTCCAAGGAATCTGTTTGAACAATTTCATAGAGTTGCTTATGTTTATTTTCTTATCATTGCTATACTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGAGGGGTTGTTTCTGTTTTGCCATTGGCCTTTGTCCTTATTGTTACAGCTGTGAAGGACGCTTACGAGGATTGGAGGCGGCATCGCGCGGATAAAGTTGAGAACAACAGGTTAGCATCGGTTTCGGTTAATGGCGAATTGATAGAGAAGAAATGGAAGGATATAAGAGTTGGTGAGATCATAAAAATCAAAGCAAATGAAAGCATTCCTTGTGATATTGTGTTGCTTTCAACTAGTGATCCAACTGGAGTAGCATATGTGCAAACTATTAACCTTGATGGTGAGTCCAATTTGAAGACTCGGTATGCGAAACTAGAGACACATTCCGAAAAGGGTCGATTCAATGGGTTAATCAAGTGTGAGAAACCAAATAGGAACATATATGGATTTCAAGCTAACATGGAAATTGATGGTAAAAGGTTGTCACTAGGTTCCTCTAATATTGTGCTTAGAGGCTGTGAAGTTAAGAATACTAATTGGGCACTTGGTGTTGCTGTATATTGTGGTGGTGAGACGAAAGCTATGCTTAACAGCTCAGGTGCTCCATCGAAGAGAAGCCGGCTCGAGACTCGAATGAATTCCGAGATCATAATCCTCTCATTCTTTCTTATAGCTTTGTGTACTGTCACCTCGGCTTGTGCAGCCGTTTGGTTGAAGCGGCACAAGGATGAGTTGAATCTCTTGCCTTATTACCGGAAACTTGATTTTTCAGAAGGGAAGGAAGAGAGCTATAAGTATTATGGATGGACATTGGAAGTTGTTTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCGATTTCCTTGTACATTTCTATGGAGCTCGTTCGTGTCGGTCAGGCCTACTTCATGATTGGTGACAACAATATGTATGACGAGGCAACAAAGTCAAGATTTCAGTGCAGGGCTTTAAACATTAATGAAGATTTGGGGCAAATTAAGTATGTCTTTTCCGACAAAACCGGTACACTTACTGAAAACAAGATGGAGTTTCGATGTTCCAGCATCTACGGGGTTGATTACAGTTCTACAAACGTCATTTTGGAAAATGAGAAAGTTGAATATTCTGTACTAGTAGATGGAAAAGTCTTGAGACCGAAGATGAAGGTTAAAGTTAATCCAGAGCTTTTTCAATTATCAAGAAGTGGACTCGAAAATACGGACGGAAAACCGATTCATGATTTCTTTCTAGCACTGGCTGCCTGCAATACTATTGTGCCTCTTGTTGTTGACACATCTGATCCTGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAAGCATTAGCTTATGCTGCTGCCGCCTACGGTTTTACGCTTATAGAACGAACCTCGGGTCATATAATCATTGATATTCAAGGAGAAAGACATAGGTTCAATGTCTTAGGCATGCATGAATTCGATAGCGATCGGAAGAGGATGTCAGTTATATTGGGATACCCTGACAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATGCATCGATGCTTAGTGTGAAAGATAAATCGTTCGACATGAACATAATAAGAGCAACCGAAACCCATCTTCACACTTATTCCACACAGGGTTTGAGAACACTTGTTATCGGAATACGAGAAATGAATACTTCAGAATTTGAGCAATGGCATGCTGCCTTCGAGACAGCAAGCGCTGCTTTGTTTGGTAGGGCCGCGACGCTTCGCAAGATTGCTAGCAATGTAGAGAGAAATATCTGCATATTAGGTGCAACTGCTATTGAAGATAAGCTGCAGCAAGGTGTGCCTGAAGCCATCGAGTCTCTGCGGACCGCGGGAATTAAAGTATGGGTGTTAACTGGGGACAAACAGGAAACTGCCATATCAATCGGCTACTCCTCGAAGCTCCTAACACGCAACATGACTCAAATTGTAATTAATAGCAACAATAAAGAGTCATGTAGAAGGAAGTTACAAGATGCCATTGTCATGACTCACAAACTTGCGTCTACATCCGAAGGAAGTTCCGATTCACTTCCAAATCGGGTAGCCTTGATTATTGATGGTACTAGCCTAGTACATATCCTTGACAGTGAACTTGAAGATCAGCTATTTCAACTTGCAAGTAGATGTTCTGTTGTTCTATGTTGTCGGGTGGCGCCATTGCAGAAGGCTGGGATTGTTTCTCTTGTTAAGAAGAGAACTTCAGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTAGACAAGCTGTAATGGCATCAGATTTTGCAATGGGACAGTTTAGGTTCTTAGTTCCTCTCTTGTTGATACATGGTCACTGGAATTACCAAAGACTAGGTTACATGATACTATACAACTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTTCTATTCACTGCATTCACTTCAACAACTGCTATAAATGAATGGAGCAGCACATTGTATTCAATAATCTACACTTCATTACCAACTATTATTGTTGGTATTCTAGACAAAGATCTGAGTAAAAGGACTCTCTTAAAGCACCCTCAGCTCTATGGAGCTGGCCAAAGACATGAAGCCTACAACAAAAGACTGTTTCTGTTCACAATGGTTGATACTTTATGGCAAAGTTTGGTTATATTTTGGGTTCCTTTATTTGCATATTGGAGTAGCACTATTGATATATCAAGTATAGGAGATCTTTGGACTCTTGCAGTGGTTATTTTGGTTAACTTACACTTAGCTATGGATGTTGGAAGATGGAGTTGGGTCACTCATGTTTCCATTTGGGGGTCTATTGTTGCAACTTTCCTTTGTGTCATGATAATTGATGCTATACCTTCATTGTTTGGTTACTGGGCTTTCTTTCATGCTGGAGGCACTGCATTGTTCTGGTTATGTTTGCTCGGAATCGTGATAGCAGCATTGCTTCCTCGATTCGCAGTTAAGTTTATTTACCAATACTATTTTCCGACCGACATTCAAATTTCAAGAGAAGCTGAGAAGGTTGTGATTCAAAGAGAAGTTGAAGGTGGTGGCCAGATAGAAATGCTTCCTATATCAGATGGTTCACTAAGATGA 3669 0.4086 MESNRPLLLQSPRTPNTQEFVHAIHVFPELPKSKSSSSNTVTFAGMDSSNPIENPSNSEALWSLKNSASRRSNTSVHSGSSGSTKSSVKEVNRSGSKSVRYGSKGADSDGLSMSQKELSDDDARLVYVNDPERTNERFEFSGNSIRTAKYSILTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGGVVSVLPLAFVLIVTAVKDAYEDWRRHRADKVENNRLASVSVNGELIEKKWKDIRVGEIIKIKANESIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKLETHSEKGRFNGLIKCEKPNRNIYGFQANMEIDGKRLSLGSSNIVLRGCEVKNTNWALGVAVYCGGETKAMLNSSGAPSKRSRLETRMNSEIIILSFFLIALCTVTSACAAVWLKRHKDELNLLPYYRKLDFSEGKEESYKYYGWTLEVVFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIGDNNMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCSSIYGVDYSSTNVILENEKVEYSVLVDGKVLRPKMKVKVNPELFQLSRSGLENTDGKPIHDFFLALAACNTIVPLVVDTSDPDVKLIDYQGESPDEQALAYAAAAYGFTLIERTSGHIIIDIQGERHRFNVLGMHEFDSDRKRMSVILGYPDNSVKLFVKGADASMLSVKDKSFDMNIIRATETHLHTYSTQGLRTLVIGIREMNTSEFEQWHAAFETASAALFGRAATLRKIASNVERNICILGATAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTRNMTQIVINSNNKESCRRKLQDAIVMTHKLASTSEGSSDSLPNRVALIIDGTSLVHILDSELEDQLFQLASRCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTSTTAINEWSSTLYSIIYTSLPTIIVGILDKDLSKRTLLKHPQLYGAGQRHEAYNKRLFLFTMVDTLWQSLVIFWVPLFAYWSSTIDISSIGDLWTLAVVILVNLHLAMDVGRWSWVTHVSIWGSIVATFLCVMIIDAIPSLFGYWAFFHAGGTALFWLCLLGIVIAALLPRFAVKFIYQYYFPTDIQISREAEKVVIQREVEGGGQIEMLPISDGSLR 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1265 1222 SUPERFAMILY HAD-like 494 961 IPR036412 -
Lal3g1265 1222 SUPERFAMILY Calcium ATPase, transduction domain A 223 361 IPR008250 -
Lal3g1265 1222 PRINTS P-type cation-transporting ATPase superfamily signature 507 521 - -
Lal3g1265 1222 PRINTS P-type cation-transporting ATPase superfamily signature 790 800 - -
Lal3g1265 1222 PRINTS P-type cation-transporting ATPase superfamily signature 907 919 - -
Lal3g1265 1222 Pfam Phospholipid-translocating P-type ATPase C-terminal 948 1188 IPR032630 -
Lal3g1265 1222 Gene3D - 196 364 - -
Lal3g1265 1222 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 891 1008 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal3g1265 1222 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 140 1195 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal3g1265 1222 MobiDBLite consensus disorder prediction 27 117 - -
Lal3g1265 1222 Pfam E1-E2 ATPase 226 464 - -
Lal3g1265 1222 Pfam Cation transport ATPase (P-type) 615 690 - -
Lal3g1265 1222 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 10 1219 - -
Lal3g1265 1222 Pfam Phospholipid-translocating ATPase N-terminal 126 191 IPR032631 -
Lal3g1265 1222 ProSitePatterns E1-E2 ATPases phosphorylation site. 509 515 IPR018303 -
Lal3g1265 1222 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 10 1219 - -
Lal3g1265 1222 MobiDBLite consensus disorder prediction 31 101 - -
Lal3g1265 1222 SFLD p-type atpase 491 971 IPR044492 -
Lal3g1265 1222 CDD P-type_ATPase_APLT_Dnf-like 142 1080 - -
Lal3g1265 1222 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 513 778 IPR023299 GO:0000166
Lal3g1265 1222 Gene3D - 611 743 IPR023299 GO:0000166
Lal3g1265 1222 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 1187 IPR023298 -
Lal3g1265 1222 Gene3D - 763 960 IPR023214 -
Lal3g1265 1222 SFLD C1.7: P-type atpase like 491 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1265 Lal-Chr3 18263262 18268373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1265 46 1222 Primary Pumps ATPases AT5G04930 68.101 0.0 1694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1265 K14802 - gmx:100813982 1872.06