Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1238 ATGGCAAAGACTTTCCCTACTTTCTTGTTTCTCTCTGTCATGTATATTATTGCAGGTATAGCAAATTCCACAGCTGCAACACCTTCCAATTTCATCAAATCTTCTTGCAGTACCACAACATACCCAACACTTTGTTTTGAATCTCTTTCTATCTATGCTTCCACAATCCAACAAGACCCTCACCAACTTGTACAAACAGCTTTATCAGTTAGCCTCAACAACACTCAATCAACAAAGACATTTGTGTCAAAGTGCTACAAATTGAAGGGTCTCAAAGCAACAGAATATGCTGCACTTCATGATTGTGCTGAAGAAATTAGCGACAGTGTTGATAGACTAAGAAAATCACTTAAGGAACTTAAGCTGTGTAAGGTTAAAGGTGAGGACTTTAGATGGCATATAAGCAATGTTGAAACATGGGTCAGTTCTGCTTTGACTGATGAAACTACTTGTGGTGATGGGTTTTCTGGAAATGCAGTTAATGGGAAAATCAAGGATTCTATTAGAGCTAAAATGGTTAATGTTGCTCAAGTTACTAGTAATGCTCTTTCACTCATTAACCAGTATGGTGCAAAGTATTAG 582 0.3746 MAKTFPTFLFLSVMYIIAGIANSTAATPSNFIKSSCSTTTYPTLCFESLSIYASTIQQDPHQLVQTALSVSLNNTQSTKTFVSKCYKLKGLKATEYAALHDCAEEISDSVDRLRKSLKELKLCKVKGEDFRWHISNVETWVSSALTDETTCGDGFSGNAVNGKIKDSIRAKMVNVAQVTSNALSLINQYGAKY 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1238 193 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 9 192 - -
Lal3g1238 193 SMART PMEI_2 27 185 IPR006501 GO:0004857
Lal3g1238 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 189 IPR035513 -
Lal3g1238 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 192 - -
Lal3g1238 193 CDD PMEI-like_3 34 189 - -
Lal3g1238 193 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 189 IPR006501 GO:0004857
Lal3g1238 193 Pfam Plant invertase/pectin methylesterase inhibitor 30 185 IPR006501 GO:0004857
Lal3g1238 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 189 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1238 Lal-Chr3 17947718 17948299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1238 32 186 Carbohydrate Esterase AT3G14310 30.128 4.42e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1238 - - gmx:100305900 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0450 5 4574389 4574778 Lal3g1238 3 17947718 17948299 LSH