Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1222 ATGGAAAGAAAAGACAACAACAACAACATAGGCATAAGTGCAACAAAACCTGAAGCAATGTCTAGAACACTTAAAGTTAAGGTTGGAAGCAGCAACATTAAACAAGGTGAAGAGAGTTTAGAGAATTCATGTTTACCTTCACCAAACATAAAGAGTTCAATAGAATCAACACCTTATGGTTCTCCTCTTGTGTCTCCTCCTTCATCAGCATTTGTTTCAGCATTGCAATCACCATATATATCTCCAAGAGCCATAATCTCAAAGCCCTCAGAAGAATCTATCTTAGAAAACCAACTAGTACATTCAACAAATACTCATACTTCTACTCCAGAAGATGTGCCTAGTAGTTCCTACACTCCCCCTTCTGATGCATTTGAATTTTCTGATGATACTTCTGATACAAAGCTCAAGTATGTGACATGTGTTCCAGTTCCTGAAGCAGCCGATCCACGGATATCGTTCTCATTTCCGGTCCCTAGAATTTCCTTTGCAAAAGGGTCTATTTCCCCTGCTTCCAATGCTAAACTAAGAAGTTGTGATGTTTACATTGGCTTCCATGGACAAAATCCCAAGCTGCTGAGATTCTGCAAGTGGCTTAAGTCTGACCTTGAGCATCAAGGGATTGATTGCTTGCTTGCCGATAGAGCGAAGTATTCGGATAGCCAAAGCCATGAGATTGCTGATAGAGTTATTTGCTCGGTGCCTTTCGGGTTGGTGGTTGTCACAAGTTACAGTTTCCTTAACCATTTGAGCATGGAAGAGGTTAGATTTTTTGCTCAAAAGAAGAACTTGATTCCTCTCTTATTTGACACTGGACCTGCTGAGATTATGGCTCTTCTTAACTGCAACTCAATTGATAAAGAATGTAAAGATGCAATTGATGGACTCATGAAATGCAATGAATTCAATCTAGAGGTTAATGATGGTAATTGGAGAAGCTGCGTAACAAAAGCGGCTACTATTTTGAGAGCGAAACTTGGTAGGAAGAATGCTGATATGAAGAACAACAATGTGCAAGGATTGGAGAATTTACCTTTCCCAAGGAACACTTACTTTGTTGGAAGAGAAAAGGAGATTATGGAGATCGAAGGTCTTCTTTTCGGGCAAGGGAATTGTCTCGAACAAGTCCAAGATCATTGTATAAAAGGAGAAGCAAGTGGTAGTGGACAATCTGAATGCCTTGGAGATGAAGAAAGTGAAATGGTTATAAGCAAAGGTGGAAGGTATATTAGTCTAGAGATAGGAAAGAGTACTAAAGAACCAAACTTAGAGGCTTGGGTTGAACCAATCATAGGAAACAATAAGAGGTTGAAGAATAAGAAGTCAAAGAGTGGAAACTATAAGAGCTTGTGTAGCAGTGTGATTTGCATTAACGGAGTTTCGGGGATTGGTAAGTCTGAGATAGCATTGGAATTTGCTCATAGATATTACCAGAGGTACAAAATGGTGTTGTGGGTTGGAGGTGAGGCTAGGTATCTGAGGCAGAACATATTGAACTTGTCTCTCAATTTCGGCTTGGATGTTGGTGCCGATTCCGAGATGGGAAGGGGTCGAATGCGTAGCTTCGAGGAGCAAGAATTTGAAGCATTCAAGAGGGTCAAAAGGGAGTTGTTTGGTGAGACACCTTACTTAGTTATAATCGATAATCTCGAGACCGAAGAGGAATGGTGGGAAGGGAAGGATCTATATGACTTGATACCAAGAAACACAGGAGGGACACATGTGATTATTACTACTAGGTTGTCCAAAGTAATGAACTATGATATTGTTCAACTTCCACCCTTGCCATTATCTGATGCAATGATCCTTATAAGAGGAAGAAAAAAGAAAGATTATTCAGCCGAAGGAATCGAGTTTCTTGAGAAATTCAATGACAAACTTGGAAGGTTAAGCTTTGGTTTATGGTTGATTGGTTCTTTGTTGTCTGAACTTGCAATTGAACCCTCTAATCTCTTTGAAGCTATAAACCAGGTACCACTCAATGAAGTATCAAACTCTTGTTATATGAGCATTGAAGAAGAGAAATGGTTCAAGAGCAATCCTTTCCTAATGAAAACCCTCCATTTTTGTTTGAGAACTTTGGAGAAAACTAAAGCAAAAGGGAACCTTCTAGCTATAAGAATGCTTCTAGTTAGTGGTTGGTTTTCTCCAGTTCCAATTTCATCCACCTTGTTACTCAATACAGCAAAGGGTGTCCCTATAGCCGAAAAAAGCTTCAAGAAGTGGACCGAATGTCTCAGCCTAAAATCGAGTTGTTTCTCGTCAACGACATGGAAAAGTGAAGAAGATTCAGCAAAACTTCTTGTGAAAATTGGACTAGCTAGAATGGCAAATCATCATGATGGATGTTGGATACAGTTCCATCCTATAACACAAACATTTGCTAGAACAAAAGGTGGTCTGCAATATGCAAATGCTGCAATTCAAGGAATAAGAAAAATCGGAAACCATGTGAACATAGATCAATCATGGGCATCAGCATTTCTAGTATTTGGCTTCAAATCTGACCCACCAATTGTGCAACTAAAAGCAATTGACATGGTTCTATACATAAAAAAAACAGCACTACCACTTGCAATTCAAGCCTTCACTACCTTCTCAAGATGCAATTCAGCTCTAGAGCTCTTAAAAGTTTGCACCAATGCACTAGAGGAAGTTGAGAAATCTTTTGTATCTCAAATACAAGATTGGTCAAATGACTCAATTTGTTGGCAAAGAAGGTTGCAAAGAAGCCAACAAAAAGTTGATGAATATGTATGGCAAGATGTGACATTATTGAAGGCAACATTACTTGAAACTAGAGCAAAGTTGCTTGCAAGAGGAGGGCATTTAGATAGTGGAAAAGAGCTATGTAGAACATGTATCAGTATCAGAACTGTGATGCTTGGTCATAACCATGCATTGACCTTGGCTGCTCAAGAGACTTTGGCAAGATTGGTTAGAATGAGGAGTAAGATTTGA 2961 0.3928 MERKDNNNNIGISATKPEAMSRTLKVKVGSSNIKQGEESLENSCLPSPNIKSSIESTPYGSPLVSPPSSAFVSALQSPYISPRAIISKPSEESILENQLVHSTNTHTSTPEDVPSSSYTPPSDAFEFSDDTSDTKLKYVTCVPVPEAADPRISFSFPVPRISFAKGSISPASNAKLRSCDVYIGFHGQNPKLLRFCKWLKSDLEHQGIDCLLADRAKYSDSQSHEIADRVICSVPFGLVVVTSYSFLNHLSMEEVRFFAQKKNLIPLLFDTGPAEIMALLNCNSIDKECKDAIDGLMKCNEFNLEVNDGNWRSCVTKAATILRAKLGRKNADMKNNNVQGLENLPFPRNTYFVGREKEIMEIEGLLFGQGNCLEQVQDHCIKGEASGSGQSECLGDEESEMVISKGGRYISLEIGKSTKEPNLEAWVEPIIGNNKRLKNKKSKSGNYKSLCSSVICINGVSGIGKSEIALEFAHRYYQRYKMVLWVGGEARYLRQNILNLSLNFGLDVGADSEMGRGRMRSFEEQEFEAFKRVKRELFGETPYLVIIDNLETEEEWWEGKDLYDLIPRNTGGTHVIITTRLSKVMNYDIVQLPPLPLSDAMILIRGRKKKDYSAEGIEFLEKFNDKLGRLSFGLWLIGSLLSELAIEPSNLFEAINQVPLNEVSNSCYMSIEEEKWFKSNPFLMKTLHFCLRTLEKTKAKGNLLAIRMLLVSGWFSPVPISSTLLLNTAKGVPIAEKSFKKWTECLSLKSSCFSSTTWKSEEDSAKLLVKIGLARMANHHDGCWIQFHPITQTFARTKGGLQYANAAIQGIRKIGNHVNIDQSWASAFLVFGFKSDPPIVQLKAIDMVLYIKKTALPLAIQAFTTFSRCNSALELLKVCTNALEEVEKSFVSQIQDWSNDSICWQRRLQRSQQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSGKELCRTCISIRTVMLGHNHALTLAAQETLARLVRMRSKI 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1222 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 659 IPR027417 -
Lal3g1222 986 MobiDBLite consensus disorder prediction 1 52 - -
Lal3g1222 986 Gene3D - 417 590 IPR027417 -
Lal3g1222 986 SMART AAA_5 451 616 IPR003593 -
Lal3g1222 986 PANTHER DNA REPAIR PROTEIN RADA 26 986 - -
Lal3g1222 986 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 26 986 - -
Lal3g1222 986 MobiDBLite consensus disorder prediction 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1222 Lal-Chr3 17709701 17712661 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1222 - - gmx:100781208 1560.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1222 3 17709701 17712661 Lal3g1222 3 17709701 17712661 ECH