Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1178 ATGGTCAATTGTACAACTATAGTTATGAAAAGAGTTCTTGAATTTTACAAAGGTTTTGAGCACATTAATAAATTGGTAGATGTTGGTGGTGGTCTTGGGATAAATCTCAATCTCATTACTTCCAAATATCCTCATCTCCATGGTATTAATTTTGACTTGCCTCATATCATAGAACATGCCCCTACCTTTGCTGGCGTGGAACACGTGGGAGTAGATATGTTTGAGAGTGTTCCTCATGGAGATGCCATTTTTATGAAGGTGGGTTTTTCCTTTTATTGGAGTGATGAGCACTGCTTGAAGCTGTTGAAGAATTGCCATAAGGCTACCCATGATGATGGAAAAGTGATTGTTTTAAAAGTACAACATGTGATAGCAATGGTTCATTTTATTAGTTTTATGATACTTTTTAAGCAATAG 417 0.3597 MVNCTTIVMKRVLEFYKGFEHINKLVDVGGGLGINLNLITSKYPHLHGINFDLPHIIEHAPTFAGVEHVGVDMFESVPHGDAIFMKVGFSFYWSDEHCLKLLKNCHKATHDDGKVIVLKVQHVIAMVHFISFMILFKQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1178 138 CDD AdoMet_MTases 24 117 - -
Lal3g1178 138 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 138 IPR016461 GO:0008168
Lal3g1178 138 Pfam O-methyltransferase domain 3 119 IPR001077 GO:0008171
Lal3g1178 138 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 119 - -
Lal3g1178 138 Gene3D Vaccinia Virus protein VP39 1 129 IPR029063 -
Lal3g1178 138 PANTHER O-METHYLTRANSFERASE 1 119 IPR016461 GO:0008168
Lal3g1178 138 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 128 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1178 Lal-Chr3 17075084 17075994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1178 1 117 Monolignol Biosynthesis Gene Families AT5G54160 63.248 7.44e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1178 K13066 - gmx:100789402 181.03