Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1165 ATGGCTGAAATCAATGGAAGCAAACAAGGTCAAGTTTTTAACAAGTTTCAAAAGTCAAAATACAAAGTAGATTCACAAGTTGATAGGAGTGACTTTAATGCACAAGAGGTTGTGGTCGATAATCACATTGTTCATTCTCAGAAAGGTCTTAAAGAGAAAGATAGGATTGATAAGTTACCAGGGCAACCACAAGTGAATTTCTCTCAATATGGAGGGTATGTCACAATTGATAAATTGGTAGGGCGTGCCCTTTATTATTACTTTGTGGAATCTCAACATTCCAAAGAAAAAATGCCCCTTCTTCTTTGGCTTAATGGAGGTCCGGGATGTTCATCTCTTGCTTATGGAGCAATGGAAGAACTTGGACCCTTTAGAGTAAACAGTGATGGAAAGACACTTGCGAAAAATAGATATTCATGGAACTACGCTGCAAATGTTTTGTTCCTTGAGTCACCTGCTGGAGTAGGATTTTCTTACTCAAATAAATCATCAGATTATGATACTAGTGGGGATAGTAAAACAACAACAGATAACTATAAATTCTTAGTGAATTGGTTGGAGAGGTTTCCTGGGTATAAGAAGAGAAATTTCTACATTGCTGGAGAAAGCTATGCTGGACATTATATCCCTCAACTAGCTCATACTATTCTACACAATAACAAAAAGGCTAACAAGACAATAATCAACTTCAAAGGAATCATGGTATGCGCTTCCTCCCTAGGAACAAAGATTTGTTTCAATTCCGAAGTTCTGTCTCGCACCAATGGCAATGAAATTGGGAATGCAGTGATCAATGATGAAACAGACAACCGAGGAACGTTTGATTATCTTGCTAGCCATGCAATCATTTCAGACCAAGCTGCAAATGATATTAACACAATCTGCAATTTCTCATCCGATGTCAATCCAATTCAGTGCCAAACCGCAATAGATGAATATGTCCGAGATGTATCCTTCATTGATCTCTACAATATTTATGCACCACTTTGTAGTAATCCCAACCTCACTGCCCTTCCCAAGAAGAACTCTATTGTTATTGATCCATGTAGTGGTGTTTATACCCATGCATATCTTAATCGTGCTAATGTTCAAGAGGCCTTACATGCCAATGTCACCAAACTCAAATATGATTGGGAATCCTGCAGTGATATTATATTTTCAAAGTGGGGAGATAGCCCTTCAACAATCATTCCCCTTTTACATGAATTCCTCAATAATGGACTCAGAGTTTGGATTTTTAGTGGTGACATAGATGGAGTAGTGCCCGTTACTTCAACCAAGTATTCCATTAAAAAGATGAATCTCTCCACTAAAACTGCTTGGTATCCATGGTTCTTCAATGGAGAGGTTGGTGGGTATGCTGAAGTATACAATGGAGGCCTAACTTTTGCAACAGTTAGAGAAGCAGGGCATGAAGTTCCTAGCTACCAACCAGGAAGAGCACTTTCATTGATTACGCACTTCTTAAACGACACTCCACTTCCCACTACTAAAAGACAACCTTAA 1506 0.3858 MAEINGSKQGQVFNKFQKSKYKVDSQVDRSDFNAQEVVVDNHIVHSQKGLKEKDRIDKLPGQPQVNFSQYGGYVTIDKLVGRALYYYFVESQHSKEKMPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLAKNRYSWNYAANVLFLESPAGVGFSYSNKSSDYDTSGDSKTTTDNYKFLVNWLERFPGYKKRNFYIAGESYAGHYIPQLAHTILHNNKKANKTIINFKGIMVCASSLGTKICFNSEVLSRTNGNEIGNAVINDETDNRGTFDYLASHAIISDQAANDINTICNFSSDVNPIQCQTAIDEYVRDVSFIDLYNIYAPLCSNPNLTALPKKNSIVIDPCSGVYTHAYLNRANVQEALHANVTKLKYDWESCSDIIFSKWGDSPSTIIPLLHEFLNNGLRVWIFSGDIDGVVPVTSTKYSIKKMNLSTKTAWYPWFFNGEVGGYAEVYNGGLTFATVREAGHEVPSYQPGRALSLITHFLNDTPLPTTKRQP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1165 501 PANTHER CARBOXYPEPTIDASE 252 495 - -
Lal3g1165 501 PANTHER CARBOXYPEPTIDASE 4 237 - -
Lal3g1165 501 Gene3D - 396 490 - -
Lal3g1165 501 ProSitePatterns Serine carboxypeptidases, serine active site. 199 206 IPR018202 GO:0004185
Lal3g1165 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 4 237 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 252 495 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 Pfam Serine carboxypeptidase 256 490 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 Pfam Serine carboxypeptidase 60 247 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Lal3g1165 501 Gene3D - 349 387 - -
Lal3g1165 501 SUPERFAMILY alpha/beta-Hydrolases 53 495 IPR029058 -
Lal3g1165 501 Gene3D alpha/beta hydrolase 50 332 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1165 Lal-Chr3 16582637 16586460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1165 357 494 Calmodulin-binding Proteins AT2G22960 28.986 1.85e-12 64.3