Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1149 ATGAGAATTGCAGAAGGTGCAGCAAAGGGGCTTGAATATTTACATGATGTAGCAAACCCACCAGTGATATATCGTGATTTCAAAGCATCAAACATATTATTGGATGAAAATTTCAATCCAAAGCTTTCTGATTTTGGATTAGCAAAGGTTGGTCCAATTGGAGATAAACCACATGTATCAACCAGAATAATGGGAACTTATGGCTATTGTGCTCCTGAGTATGCATCCACTGGTCATTTGACTGCAAGATCAGATGTTTACAGCTTTGGAGTTGTGTTTTTAGAAATGATCACAGGAAGAAGAGTAATTGATAGTTCAAGACCATCAAATGAGCAAAACTTAGTCCTATGGGCACAACCACTTCTCAAAGACAGAAGGAGATTCACATTAATGGCTGATCCCATGCTAAGAGATAACTACCCCATAAAGGGTCTATATCAAGCTCTAGCAGTAGCAGCAATGTGTCTCCAAGTGGAAGCGGAAACTAGGCCTTGGATCAGTGATGTAGTTATAGCTCTTGAATTTTTAGCCAAGAAGAAATTAGAAGTGGGTCAAGAACCACATACAGAAGAGAGTTCTGTTCAGCATGGAGATAGTTCTGGGGACTGCGAATCTAATGACGACAGTGATGATGATAACGACAGTGATGATGATGATGAGATTGATGACGATGAAGATGATGAGGAGGAGGATGATGAGGATAATGCCGATGATCCTGATCATAATCACGATGATAAAAAGGGTAGTGGCCATTAA 756 0.3995 MRIAEGAAKGLEYLHDVANPPVIYRDFKASNILLDENFNPKLSDFGLAKVGPIGDKPHVSTRIMGTYGYCAPEYASTGHLTARSDVYSFGVVFLEMITGRRVIDSSRPSNEQNLVLWAQPLLKDRRRFTLMADPMLRDNYPIKGLYQALAVAAMCLQVEAETRPWISDVVIALEFLAKKKLEVGQEPHTEESSVQHGDSSGDCESNDDSDDDNDSDDDDEIDDDEDDEEEDDEDNADDPDHNHDDKKGSGH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1149 251 PANTHER OS07G0668900 PROTEIN 1 218 - -
Lal3g1149 251 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1149 251 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Lal3g1149 251 MobiDBLite consensus disorder prediction 184 251 - -
Lal3g1149 251 Gene3D Transferase(Phosphotransferase) domain 1 1 200 - -
Lal3g1149 251 Pfam Protein kinase domain 3 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1149 251 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1149 251 MobiDBLite consensus disorder prediction 184 203 - -
Lal3g1149 251 MobiDBLite consensus disorder prediction 204 238 - -
Lal3g1149 251 PANTHER OS07G0668900 PROTEIN 1 218 - -
Lal3g1149 251 SUPERFAMILY Protein kinase-like (PK-like) 2 176 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1149 Lal-Chr3 16361405 16362718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1149 1 177 Glycoside Hydrolase AT3G07070 71.186 1.49e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal3g1149 Pkinase 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1149 - - gmx:100790474 327.02