Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1148 ATGAGTTGCTTTCCATGTTGTACCTCACAAGAGAGGATTAACAAGAGGTCATTGAAGAAGAGTATTAAGGAATACCGTGAAGGAAAGGCTAAAACCTCATTTAGCAACCTCTCTCTTAAAACTGATAGTGGCAAAAAAAGGTTCATAGCAGGAGAGATATCAAAGCTTGGAAAAGGAAATATTACCACTACAATATTTTCATATCGTCAGCTATGTGATGCAACTCAAAATTTTCACCCTTGTAATATGATTGGTGAAGGAGGCTTTGGGAGAGTATATAGAGGACACATTAAAAGCACAAACCAAGTTGTTGCAGTTAAGCAACTTGACAGGAATGGGTTTCAAGGAAACAAGGAATTTCTTGTAGAGGTTTTGATTTTAAGTCTCTTGCACCACCCTAATCTTGTTAGTTTGGTAGGGTATTGTGCTGAAGGTGAACAAAGGATTTTGGTATATGAATATATGGTCAATGGTTCTTTAGAAGATCACCTACTTGGTAAGTAA 504 0.369 MSCFPCCTSQERINKRSLKKSIKEYREGKAKTSFSNLSLKTDSGKKRFIAGEISKLGKGNITTTIFSYRQLCDATQNFHPCNMIGEGGFGRVYRGHIKSTNQVVAVKQLDRNGFQGNKEFLVEVLILSLLHHPNLVSLVGYCAEGEQRILVYEYMVNGSLEDHLLGK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1148 167 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 165 - -
Lal3g1148 167 ProSiteProfiles Protein kinase domain profile. 78 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g1148 167 SUPERFAMILY Protein kinase-like (PK-like) 59 166 IPR011009 -
Lal3g1148 167 Gene3D Phosphorylase Kinase; domain 1 51 154 - -
Lal3g1148 167 Pfam Protein tyrosine and serine/threonine kinase 82 164 IPR001245 GO:0004672|GO:0006468
Lal3g1148 167 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Lal3g1148 167 PANTHER OS07G0668900 PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1148 Lal-Chr3 16358707 16360508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1148 1 165 Glycoside Hydrolase AT3G07070 50.595 9.08e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal3g1148 PK_Tyr_Ser-Thr 2.1e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1148 - - gmx:100790474 286.96