Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1100 ATGGGCAAATCTAGTTGTTTATCTCTTATATCCTTTTTTATTTTCTCACTCTTCATGGCTGAAATCGATGGAAGCAAACAAGGTCAAGTTTTTAACAAGTTTCAAAAGTCAAAATACAAAGTAGATTCACAAGTTGATAGGAGTGACTTTAATGCACAAGAGGTTGTGGTCGATAATCACATTGTTCATTCTCAGAAAGGTCTTAAAGAGAAAGATAGGATTGATAAGTTACCAGGGCAACCACAAGTGAATTTCTCTCAATATGGAGGGTATGTCACAATTGATAAATTGGCGGGGCGTGCCCTTTATTATTACTTTGTGGAATCTCAACATTCCAAAGAAAAAATGCCCCTTCTTCTTTGGCTTAATGGAGGTCCGGGATGTTCATCTCTTGCTTATGGAGCAATGGAAGAACTTGGACCCTTTAGAGTAAACAGTGATGGAAAGACACTTGCGAAAAATAGATATTCATGGAACTACGCTGCAAATGTTTTGTTCCTTGAGTCACCTGCTGGAGTAGGATTTTCTTACTCAAATAAATCATCAGATTATGATACTAGTGGGGATAGTAAAACAGCAACAGATAACTATAAATTCTTAGTGAATTGGTTGGAGAGGTTTCCTGGGTATAAGAAGAGAAATTTCTACATTGCTGGAGAAAGCTATGCTGGACATTATATCCCTCAACTAGCTCATACTATTATTCTACACAATAACAAAAAGGCTAACAAGACAATAATCAACCTCAAAGGAATCATGATTGGGAATGCAGTGATCAATGATGAAACAGACAACCGAGGAACGTTTGATTATCTTGCTAGCCATGCAATCATTTCAGACCAAGCTGCAAATGATATTAACACAATCTGCAATTTCTCATCCGATGTCAATCCAATTCAGTGCCAAACCGCAATAGATGAATATGTCCGAGATGTATCCTTCATTGATCTCTACAATATTTATGCACCACTTTGTAGTAATCCCAACCTCACTGCCCTTCCCAAGAAGAACTCTATTGTTATTGATCCATGTAGTGGTGTTTATACCCATGCATATCTTAATCGTGCTAATGTTCAAGAGGCCTTACATGCCAATGTCACCAAACTCAAATATGATTGGGAATCCTGCAGTGATATTATATTTTCAAAGTGGGGAGATAGCCCTTCAACAATCATTCCCCTTTTACATGAATTCCTCAATAATGGACTCAGAGTTTGGATTTTTAGTGGTGACATAGATGGAGTAGTGCCCGTTACTTCAACCAAGTATTCCATTAAAAAGATGAATCTCTCCACTAAAACTGCTTGGTATCCATGGTTCTTCAATGGAGAGGTTGGTGGGTATGCTGAAGTATACAATGGAGGCCTAACTTTTGCAACAGTTAGAGAAGCAGGGCATGAAGTTCCTAGCTACCAACCAGGAAGAGCACTTTCATTGATTACGCACTTCTTAAACGACACTCCACTTCCCACTACTAAAAGACAACCTTAA 1491 0.3823 MGKSSCLSLISFFIFSLFMAEIDGSKQGQVFNKFQKSKYKVDSQVDRSDFNAQEVVVDNHIVHSQKGLKEKDRIDKLPGQPQVNFSQYGGYVTIDKLAGRALYYYFVESQHSKEKMPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLAKNRYSWNYAANVLFLESPAGVGFSYSNKSSDYDTSGDSKTATDNYKFLVNWLERFPGYKKRNFYIAGESYAGHYIPQLAHTIILHNNKKANKTIINLKGIMIGNAVINDETDNRGTFDYLASHAIISDQAANDINTICNFSSDVNPIQCQTAIDEYVRDVSFIDLYNIYAPLCSNPNLTALPKKNSIVIDPCSGVYTHAYLNRANVQEALHANVTKLKYDWESCSDIIFSKWGDSPSTIIPLLHEFLNNGLRVWIFSGDIDGVVPVTSTKYSIKKMNLSTKTAWYPWFFNGEVGGYAEVYNGGLTFATVREAGHEVPSYQPGRALSLITHFLNDTPLPTTKRQP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1100 496 PANTHER CARBOXYPEPTIDASE 12 490 - -
Lal3g1100 496 Gene3D - 344 382 - -
Lal3g1100 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 490 IPR001563 GO:0004185|GO:0006508
Lal3g1100 496 Gene3D alpha/beta hydrolase 68 327 IPR029058 -
Lal3g1100 496 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Lal3g1100 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Lal3g1100 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Lal3g1100 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Lal3g1100 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Lal3g1100 496 SUPERFAMILY alpha/beta-Hydrolases 71 490 IPR029058 -
Lal3g1100 496 Gene3D - 391 485 - -
Lal3g1100 496 Pfam Serine carboxypeptidase 78 485 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1100 Lal-Chr3 14843071 14846841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1100 352 489 Calmodulin-binding Proteins AT2G22960 28.986 1.33e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1100 K16297 - gmx:100783864 707.597