Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0993 ATGAGACATTTGCATCTATTTATCGCTATTCAAGGGGACAGAATTCAAGTCTCTGTCCGAAAGGATCAGTTTAACGAATGGAGAGAACATTTGGTTGAGAGTTCAACTTATGTCATGCACAATTTTAATGTCATGCACAATGACATCCAATTTAAGGCATGTGACCATGTTTACAGAATGCAATTCACTGCCGGTACCACTCTCAAACAAAGAGAATTTCCTGATATTCCTGAATGGGAATATGATTTCAAAAAGTTTGGTGACATCCTTGACGGAAACGGTAGAAATGATTTACTAATAGATATCATTGGTGCTTTTGATAAGGTAATATTCTCCCAAACACAAGGCAATTTGAAGAAAGTTGTCTTCAGTTTGAAAGATTTTAGTGGTGATTTCATTAACTGTACTCTGTGGGAATCACATGCTACCAAATTCGAGAAACACTATAACAACCACTGTAATGTTGAACCTATGATAATTTTGTTAACTCATGCTAGAATCAAAGAAGGACAAGGTAAGTATCCACATAGCATTTCCAACTCATGGTGCGGATCAAAAATATTGATTGGTGAAGAAATTCCCAACATTGACAAGTACAAACAAAGTCTATCATGTGATACATTGAGCCATAGTAACAGCCAAATGTCACAGTATTCTAACTTATCTGATGATGAGCGATTTATGTATAAAGCTGAAGTCAAGAGTATTACAGAAATTTCTGCAATTACATCTTCTGAGGAAATAACCTGTGTAACAGTTGGGACGATAGGAATGTTTGTTGTTGGCAAACACGGATGGTACTATGAAGGTTGTACTAAATGTACAAAGAAGACTGATGTTAAAGATGGCCCATTCACATGCAAGTATAAACTGGATATTAAAGTCATACACCAACATGGGAGTGGAAGGTTTGTTTTCTGGGATCGTCAATGTGCTGACATCATTGGCGTATCGACATCTGACTTAAGAGATCAGATGGTTGCAGAAGGTGAAGATGATCCCAATGCATTCCCTTTAATTCTGGATGAACTGCTTGCAAGAACAATGGCTCTAAGGGTCAAAGTGCAACCCTCATACAACCAATCTTCTGTTATCAGACTTTCTGAGGATCCAAATTTAATCAAGACTATACTTGATCAAATTGTCATATTTCAGTCTGTGTCTATTACTGCTGATCATGATCCATACCTTTTACAAGTTTTAACTCCAGCCAAACGATTATCGGCTGACAATGATGTGGACCTCATACAAAGTCCACTGTATAATTCTACTCAGTTGTCATCTTCAAAGGTGGCAAAGCATATCAACATTGACTGA 1317 0.3713 MRHLHLFIAIQGDRIQVSVRKDQFNEWREHLVESSTYVMHNFNVMHNDIQFKACDHVYRMQFTAGTTLKQREFPDIPEWEYDFKKFGDILDGNGRNDLLIDIIGAFDKVIFSQTQGNLKKVVFSLKDFSGDFINCTLWESHATKFEKHYNNHCNVEPMIILLTHARIKEGQGKYPHSISNSWCGSKILIGEEIPNIDKYKQSLSCDTLSHSNSQMSQYSNLSDDERFMYKAEVKSITEISAITSSEEITCVTVGTIGMFVVGKHGWYYEGCTKCTKKTDVKDGPFTCKYKLDIKVIHQHGSGRFVFWDRQCADIIGVSTSDLRDQMVAEGEDDPNAFPLILDELLARTMALRVKVQPSYNQSSVIRLSEDPNLIKTILDQIVIFQSVSITADHDPYLLQVLTPAKRLSADNDVDLIQSPLYNSTQLSSSKVAKHINID 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0993 438 SUPERFAMILY Nucleic acid-binding proteins 81 209 IPR012340 -
Lal3g0993 438 CDD RPA1_DBD_A_like 11 67 - -
Lal3g0993 438 Gene3D - 7 70 IPR012340 -
Lal3g0993 438 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 23 317 - -
Lal3g0993 438 Gene3D - 74 215 IPR012340 -
Lal3g0993 438 SUPERFAMILY Nucleic acid-binding proteins 234 360 IPR012340 -
Lal3g0993 438 Gene3D - 217 380 IPR012340 -
Lal3g0993 438 CDD RPA1_DBD_B_like 119 203 - -
Lal3g0993 438 Pfam Domain of unknown function DUF223 11 96 IPR003871 -
Lal3g0993 438 PANTHER REPLICATION FACTOR A 1, RFA1 23 317 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0993 Lal-Chr3 11325746 11334713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0993 11 368 Core DNA Replication Machinery Family AT5G08020 21.503 5.79e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0993 - - lang:109343677 596.275