Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0961 ATGGATTCGAGTCCTGGATGTTCATCTCTTGCTTATGGAGCAATGGAAGAACTTGGACCCTTTAGAGTAAACAGTGATGGAAAGACACTTAAGAAAAATATATATTCATGGAACTATGCTGCAAATGTTTTGTTCCTTGAGTCACCTGCTGGAGTTGGATTTTCTTACTCAAATAAATCATCAGATTATGATACTAGTGGGGATAGGAGAACTGCAATAGATAACTATATATTCTTAGTGAATTGGTTGGAGAGGTTTCCTGAGTTTAAGAAGAGAGATTTCTACATTGCTGGAGAAAGCTATGCTGGACATTATGTCCCTCAACTTGCTCATACTATTCTACACAATAACAAAAAGGCTAACAAGACAATAATCAACCTCAAAGGAATCATGATTGGGAATGCCGTGATCAATGATGAAACGGACAATCGAGGAAGATATGATTATCTTGCTAGCCATGCAATCATATCAGACCAAGCCGCACATGATATCAACACATTCTGCAATTTCTCATCCGATGTCATTCCAATTCAGTGCCGAACAGCAATAGATGAATATGATCGAGATGTTTCCTTCATTGATATCTACAACATTTATGCACCACTTTGCAATAATCCAAACCTCACTGCCCTTCCAAAGAAGAACTCTATTGTTATTGATCCGTGTAGTGGTGTTTATACCCATGCATATCTTAACCGTGCTAATGTTCAAGAGGCCTTACATGCCAATGTCACCAAACTCAAATATGACTGGGAATCTTGCAGTGATGTTATATCAGAGTGGGATGATAGCCCTTCAACAATCATTCCCCTTTTACATGAATTCCTCAATAATGGACTTAGAGTTTGGATTTTTAGTGGTGACACAGATGGAAGAGTGCCCGTTACTTCAACCAAGTATTCCATTAAAAAGATGAACCTCTCCACTAAAACTCCTTGGTATCCATGGTTCTTCAATGGAGAGGTTGGTGGGTATGCTGAAGTGTACAACGGAGGCCTAACTTTTGCAACAGTGAGAGAAGCAGGGCATGAAGTTCCTAGCTACCAACCAGGAAGAGCACTTTCGTTGATTATGCACTTCTTAAAGGGCACTCAACTTCCCACTACTAAAAGACAACCTTAA 1122 0.3948 MDSSPGCSSLAYGAMEELGPFRVNSDGKTLKKNIYSWNYAANVLFLESPAGVGFSYSNKSSDYDTSGDRRTAIDNYIFLVNWLERFPEFKKRDFYIAGESYAGHYVPQLAHTILHNNKKANKTIINLKGIMIGNAVINDETDNRGRYDYLASHAIISDQAAHDINTFCNFSSDVIPIQCRTAIDEYDRDVSFIDIYNIYAPLCNNPNLTALPKKNSIVIDPCSGVYTHAYLNRANVQEALHANVTKLKYDWESCSDVISEWDDSPSTIIPLLHEFLNNGLRVWIFSGDTDGRVPVTSTKYSIKKMNLSTKTPWYPWFFNGEVGGYAEVYNGGLTFATVREAGHEVPSYQPGRALSLIMHFLKGTQLPTTKRQP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0961 373 Gene3D - 268 363 - -
Lal3g0961 373 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 3 367 IPR001563 GO:0004185|GO:0006508
Lal3g0961 373 Gene3D alpha/beta hydrolase 1 205 IPR029058 -
Lal3g0961 373 Gene3D - 222 259 - -
Lal3g0961 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 33 45 IPR001563 GO:0004185|GO:0006508
Lal3g0961 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 46 56 IPR001563 GO:0004185|GO:0006508
Lal3g0961 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 82 107 IPR001563 GO:0004185|GO:0006508
Lal3g0961 373 PRINTS Carboxypeptidase C serine protease (S10) family signature 333 346 IPR001563 GO:0004185|GO:0006508
Lal3g0961 373 Pfam Serine carboxypeptidase 5 363 IPR001563 GO:0004185|GO:0006508
Lal3g0961 373 ProSitePatterns Serine carboxypeptidases, serine active site. 96 103 IPR018202 GO:0004185
Lal3g0961 373 SUPERFAMILY alpha/beta-Hydrolases 5 366 IPR029058 -
Lal3g0961 373 PANTHER CARBOXYPEPTIDASE 3 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0961 Lal-Chr3 10481193 10486291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0961 230 366 Calmodulin-binding Proteins AT2G22960 29.927 3.67e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0961 K16297 - gmx:100804815 576.244