Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0960 ATGGCCAATGCAAGTTTTCTAGCTCTTATATCCTTTCTTGTTTTCTCATTCTTTATTGCTGAAATCCATGGAAGCAAGCAAGGTCAAGTTTTTGACAAGTTTCAAAAGTCAAAATACAAAGTAGATTCACAAATTGATACGAGTGACTTCAATTCACAAGAGGTTGTGGTTGATAATCACATTGTTCATTCTCAAAAGGGTCTTCAAGAGAAGGATAAAATTGTTAAATTGCCAGGGCAACCACATGTGAATTTCTCTCAATATGGAGGGTATGTCACAATTGATAAATTGGCAGGGCGTGCCCTATATTATTACTTTGTGGAATCTCAACATTCTAAAGAAAAAACGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTCTTGCTTATGGAGCTATGGAAGAACTTGGACCCTTTAGAGTAAACAGTGATGGAAAGACACTTAAGAAAAATATATATTCATGGAACTATGCTGCAAATGTTTTGTTCCTTGAGTCACCTGCTGGAGTTGGATTTTCTTACTCAAATAAATCATCAGATTATGATACTAGTGGGGATAGGAGAACTGCAATAGATAACTATATATTCTTAGTGAATTGGTTGGAGAGGTTTCCTGAGTTTAAGAAGAGAGATTTCTACATTGCTGGAGAAAGCTATGCTGGACATTATGTCCCTCAACTTGCTCATACTATTCTACACAATAACAAAAAGGCTAACAAGACAATAATCAACCTCAAAGGAATCATGATTGGGAATGCCGTGATCAATGATGAAACGGACAATCGAGGAAGATATGATTATCTTGCTAGCCATGCAATCATATCAGACCAAGCCGCACATGATATCAACACATTCTGCAATTTCTCATCCGATGTCATTCCAATTCAGTGCCGAACAGCAATAGATGAATATGATCGAGATGTTTCCTTCATTGATATCTACAACATTTATGCACCACTTTGCAATAATCCAAACCTCACTGCCCTTCCAAAGAAGAACTCTATTGTTATTGATCCGTGTAGTGGTGTTTATACCCATGCATATCTTAACCGTGCTAATGTTCAAGAGGCCTTACATGCCAATGTCACCAAACTCAAATATGACTGGGAATCTTGCAGTGATGTTATATCAGAGTGGGATGATAGCCCTTCAACAATCATTCCCCTTTTACATGAATTCCTCAATAATGGACTTAGAGTTTGGATTTTTAGTGGTGACACAGATGGAAGAGTGCCTGTTACTTCAACCAAGTATTCCATTAAAAAGATGAACCTCTCCACTAAAACTCCTTGGTATCCATGGTTCTTCAATGGAGAGGTTGGTGGGTATGCTGAAGTGTACAACGGAGGCCTAACTTTTGCAACAGTGAGAGAAGCGGGGCATGAAGTTCCTAGCTACCAACCAGGAAGAGCACTTTCGTTGATTATGCACTTCTTAAAGGGCACTCAACTTCCCACTACTAAAAGACAACCTTAA 1485 0.3865 MANASFLALISFLVFSFFIAEIHGSKQGQVFDKFQKSKYKVDSQIDTSDFNSQEVVVDNHIVHSQKGLQEKDKIVKLPGQPHVNFSQYGGYVTIDKLAGRALYYYFVESQHSKEKTPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLKKNIYSWNYAANVLFLESPAGVGFSYSNKSSDYDTSGDRRTAIDNYIFLVNWLERFPEFKKRDFYIAGESYAGHYVPQLAHTILHNNKKANKTIINLKGIMIGNAVINDETDNRGRYDYLASHAIISDQAAHDINTFCNFSSDVIPIQCRTAIDEYDRDVSFIDIYNIYAPLCNNPNLTALPKKNSIVIDPCSGVYTHAYLNRANVQEALHANVTKLKYDWESCSDVISEWDDSPSTIIPLLHEFLNNGLRVWIFSGDTDGRVPVTSTKYSIKKMNLSTKTPWYPWFFNGEVGGYAEVYNGGLTFATVREAGHEVPSYQPGRALSLIMHFLKGTQLPTTKRQP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0960 494 Gene3D alpha/beta hydrolase 68 326 IPR029058 -
Lal3g0960 494 PANTHER CARBOXYPEPTIDASE 9 488 - -
Lal3g0960 494 Gene3D - 343 380 - -
Lal3g0960 494 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Lal3g0960 494 SUPERFAMILY alpha/beta-Hydrolases 76 487 IPR029058 -
Lal3g0960 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 488 IPR001563 GO:0004185|GO:0006508
Lal3g0960 494 Pfam Serine carboxypeptidase 79 484 IPR001563 GO:0004185|GO:0006508
Lal3g0960 494 Gene3D - 389 484 - -
Lal3g0960 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Lal3g0960 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Lal3g0960 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Lal3g0960 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0960 Lal-Chr3 10448586 10452506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0960 351 487 Calmodulin-binding Proteins AT2G22960 29.927 4.46e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0960 K16297 - gmx:100783864 720.694