Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0846 ATGGAAAACATGCATAACTCAAACATTTTCATTCCCTTCACTTTTCTAATTCTTATTTTTAGATTTTCCAATGCTTTGGATTGTTCTAGTCCACCAAAGGTTATTGATGTTAACCAATCAGGTGAAGGAGGAAGCTTCAGAACTATCCAAAGTGCCATTGACTCTATTCCAAAACCAAACACTCAGTGGATTCACATTAGAATTTCTGCTGGAACTTATACTCGCGATTCACTAATGTTTGCGTTTATTGCGATTGTGGTCATTGTGACCATTGTGATGTGGATTTTAGCCGTTGCGATAGAAGCTGTCACTATCTCTAAAAATAGGCCATGCATCTTTCTGGAAGGAGCGGGAAGTTCCTCCACCATCGTTCAAGCTAGTTATCATGAGAGAATGAGTACCAGTGCTACTTTAATATCATTGGCAGATGATATCATTGCAAAGGATATTACATTCAAGAATAAAAATTAA 471 0.3715 MENMHNSNIFIPFTFLILIFRFSNALDCSSPPKVIDVNQSGEGGSFRTIQSAIDSIPKPNTQWIHIRISAGTYTRDSLMFAFIAIVVIVTIVMWILAVAIEAVTISKNRPCIFLEGAGSSSTIVQASYHERMSTSATLISLADDIIAKDITFKNKN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0846 156 Gene3D - 31 156 IPR012334 -
Lal3g0846 156 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 75 - -
Lal3g0846 156 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 100 154 - -
Lal3g0846 156 PANTHER PECTINESTERASE 12 75 - -
Lal3g0846 156 PANTHER PECTINESTERASE 100 154 - -
Lal3g0846 156 SUPERFAMILY Pectin lyase-like 32 154 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0846 Lal-Chr3 7819627 7820512 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0846 46 155 Carbohydrate Esterase AT2G19150 37.273 1.85e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0846 - - lang:109339855 207.994