Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0844 ATGGAAAACATGCATAACTCAAACATTTTCATTCCCTTCACTTTTCTAATTCTTATTTTTAGATTTTCCAATGCTTTGGATTGTTCTAGTCCACCAAAGGTTATTGATGTTAACCAATCAGGTGAAGGAGGAAGCTTCAGAACTATCCAAAGTGCCATTGACTCTATTCCAAAACCAAACACTCAGTGGATTCACATTAGAATTTCTGCTGGAACTTATACAGAAGCTGTCACTATCCCTAAAAATAGGCCATGCATCTTTCTGGAAGGAGCCGGAAGTTCCTCCACCATCGTTCAAGCTAGTTATCATGACAGAATGAGTACGAGTGCTACTTTAATATCATTGGCAGATGATATCATTGCAAAAGACATTACATTCAAGAACACATATAACAATCCAGGTTTTGCACATGCTAATGTAGTAAAGATGCTTCCAGCATCAGCAGCTAAAGTTGAAGGTAATAGAAGTGCCTTCTATAACTGTTCCTTTAAAGGAGTGCAAGATACCTTACATGATCATAGTGGACTACATTATTACTATAATTGCTACATTCAAGGTGCAATAGATTTCATATTTGGAGATGGTCAATCCATCTACGAGAAATGTGCCATAAATTTTACAACGGGGATTGATGGACCTATCAGGGACGGTGTTATAACAGCACAAAATCGAGAATCAGCCGGTTCTACAAGTGGGTTTGTTTTTAAAGAATGTACTATAAATGGAATCAATGGGAAGACCCAACTTGGAAGAGCATATGGACCTTACTCTAGAGTTATCATTGCTAATTCATATCTCTCAGATGTTGTTCGACCTGAAGGTTGGTCTACGTGGAACCAACTAGAGGAAAATCTTACGTATGTGGAGGTGAATAACACTGGACCTGGAGCAAACAATGCTAAACGTGTGAAGTGGATGAAGACCTTGAGTGAAGAAGAGTTAAACAGTTTCTTGAACATTTCTTATGTAGACATAGATGGATGGATTAACAAACAACGCAATACTAATAATTTTTAA 1017 0.3746 MENMHNSNIFIPFTFLILIFRFSNALDCSSPPKVIDVNQSGEGGSFRTIQSAIDSIPKPNTQWIHIRISAGTYTEAVTIPKNRPCIFLEGAGSSSTIVQASYHDRMSTSATLISLADDIIAKDITFKNTYNNPGFAHANVVKMLPASAAKVEGNRSAFYNCSFKGVQDTLHDHSGLHYYYNCYIQGAIDFIFGDGQSIYEKCAINFTTGIDGPIRDGVITAQNRESAGSTSGFVFKECTINGINGKTQLGRAYGPYSRVIIANSYLSDVVRPEGWSTWNQLEENLTYVEVNNTGPGANNAKRVKWMKTLSEEELNSFLNISYVDIDGWINKQRNTNNF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0844 338 PANTHER PECTINESTERASE 12 331 - -
Lal3g0844 338 SUPERFAMILY Pectin lyase-like 31 331 IPR011050 -
Lal3g0844 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 331 - -
Lal3g0844 338 Pfam Pectinesterase 39 323 IPR000070 GO:0030599|GO:0042545
Lal3g0844 338 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Lal3g0844 338 Gene3D - 31 337 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0844 Lal-Chr3 7799381 7803040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0844 46 279 Carbohydrate Esterase AT2G19150 47.234 2.00e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0844 - - lang:109339855 583.563