Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0842 ATGCATAAGTCAAAGATTTTCATTCCCTTCACTTTTCTAATTCTCATTTTTAGATTTTCCAATGCTTTGGTTTGTTCTACTCCACCAAAGGTTATTAATGTTAACCACTCAGGTGAAGGAGGAAGCTTCAAAACTATCGAAAGCGCCATTGACTCTATTCCAAAACCAAACACTCAGTGGACTCACATTAGAATTTCTGCTGGAACTTATACAGAAAATGTCACTATCTCTAAAAATAGGCCATGCATCTTTCTTGAAGGAGCCGGAAGTTCCTCCACCATCGTTCAAGCTGGTTATCCTGAGAGTCCTACTTTATTATCATTGGCAGATGATATCATTGCAAAGGATATTACTTTCACAAACACATATAATAATCCAGGTTTTGCACATGCTAATGCAATAGATATACGTCAAGCATTAGCAGCTAAAGTTGAAGGTAATAGAAGTGCCTTCTATAACTGTTCCTTTAAAGGAGTGCAAGATACCTTACATGATCATAGTGGACTACATTATTACTATAATTGCTACATTCAAGGTGCAATAGATTTCATATTTGGAGATGGTCAATCCATCTACGAGAAATGTGCCATAAATTTTACAACGGGGATTGATGGACCTATCAGGGATGGTGTTATAACAGCACAAAAACGAGAATCAACCGATTCCACAAGTGGGTTTGTTTTTAAAGAATGTACTATAAATGGAATCAATGGGAAGACCCAACTTGGAAGAGCATATGGACCTTACTCTAGAGTTATCATTGCTAATTCATATCTCTCAGATGTTGTTCGACCTGAAGGTTGGTCTACATGGAACCAACTAGAGGAAAATCTTACATATGTGGAGGTGAATAACACTGGACCTGGAGCAAACAATGCTAAACGTGTGAAGTGGATGAAGACCTTGAGTGAAGAAGAGTTAAACAGTTTCTTGAACATCTCTTATGTAGACATAGATGGATGGATTCACAAACAACGCAATGCTAATAATTTTTAA 996 0.3705 MHKSKIFIPFTFLILIFRFSNALVCSTPPKVINVNHSGEGGSFKTIESAIDSIPKPNTQWTHIRISAGTYTENVTISKNRPCIFLEGAGSSSTIVQAGYPESPTLLSLADDIIAKDITFTNTYNNPGFAHANAIDIRQALAAKVEGNRSAFYNCSFKGVQDTLHDHSGLHYYYNCYIQGAIDFIFGDGQSIYEKCAINFTTGIDGPIRDGVITAQKRESTDSTSGFVFKECTINGINGKTQLGRAYGPYSRVIIANSYLSDVVRPEGWSTWNQLEENLTYVEVNNTGPGANNAKRVKWMKTLSEEELNSFLNISYVDIDGWIHKQRNANNF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0842 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 324 - -
Lal3g0842 331 ProSitePatterns Pectinesterase signature 2. 177 186 IPR033131 -
Lal3g0842 331 SUPERFAMILY Pectin lyase-like 26 323 IPR011050 -
Lal3g0842 331 PANTHER PECTINESTERASE 12 324 - -
Lal3g0842 331 Pfam Pectinesterase 36 316 IPR000070 GO:0030599|GO:0042545
Lal3g0842 331 Gene3D - 27 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0842 Lal-Chr3 7737119 7741644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0842 43 323 Carbohydrate Esterase AT1G05310 37.755 1.80e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0842 - - lang:109339855 557.755