Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0835 CTTCGTAGACGACAACGCGGTCAAACCAACGGGGCGGTTGCTTCTACCGCCGTTAGGCTATTCTCCACATATCACGATCTTCCTCAAACGACACCGTTTTCTTTTACCCACATCCATAACCCTCTTCACAAAATTACTTTCCCCAAAAACAATAGGAAACTGTTGTTGAGGCAATTAGAAGTGAAGATATTTGTGAAGAATGAAGTTTCAATGAGGTATGGATTGTGTGGATGTGGGTTTTGGCTAGCTGGAGTGTTGCTAAATGGAAAAATTAGGCTAATGGCATCTTCTTTAGACTCGTGGACGAAGGAATACAATGAAGCAGTTAAACTCGCTGATGATATCAATGGCATGATTTCTGAGCGGAGTTCCTTTCCTGCGTCTGGACCTGAAACCCAGCGTCATTCATCTGCTATAAGAAGAAAGATTACGATATTAGGGACCAGACTCGATAGCTTGCAGTCCCTTTTATCAAGGAACCCTGGAAAATCTGAGAAGGAGATGAATCGTCGCAAAGACACTCTTTCAAATTTAAGATCGAAAGTCAACCAAATGGCTTCGACATTGAGCATGTCAAACTTTGCAAACAGGGATAGTTTGCTTGGGCCAGATATAAAACCGGATGCAATGAGCAGAACCGTTGGCCTGGACAACAGTGGACTTGTTGGACTTCAACGGCAAATTATGAAAGAGCAAGATGAGGGACTTGAAAAATTGGAGGAGACTGTGATAAGTACTAAACATATTGCACTGGCAGTGAATGAAGAGCTTGGTTTACACACTAGACTCATTGATGACTTGGATGAACATGTAGATGTTACAGATTCTCGACTGAGGGTAACTCTCTTACTAATTACTTCGAGTGCAGAAGAACTTGGCAGTTTTGAACAAACGCACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCCGTGATTGGTATAGTTGTTTTGGTCGTGGTGATATGGCTGTTGGTCAAATATTTATAATGATAAAAGTATCGACTCATAGAGGGTGGGCAGACACAATGGTAAGGTTGTTACTCAGTGATCATGAGGTTACATGTTCAAATTCTGGAGACAGTGTTTCTACTTTGTGGGGAATTATTGACAGTGTAGTTACACTGAGCATGGGGATGTGCCAAGTGCAGCTTGGCCAAGTGAAGAATCAGGCCAGACGAAGAGGTTGTGCACAGCGCACCGCACCGCACCCAACGCTCGAGGAAAAACTCAGAATGTAA 1242 0.4332 LRRRQRGQTNGAVASTAVRLFSTYHDLPQTTPFSFTHIHNPLHKITFPKNNRKLLLRQLEVKIFVKNEVSMRYGLCGCGFWLAGVLLNGKIRLMASSLDSWTKEYNEAVKLADDINGMISERSSFPASGPETQRHSSAIRRKITILGTRLDSLQSLLSRNPGKSEKEMNRRKDTLSNLRSKVNQMASTLSMSNFANRDSLLGPDIKPDAMSRTVGLDNSGLVGLQRQIMKEQDEGLEKLEETVISTKHIALAVNEELGLHTRLIDDLDEHVDVTDSRLRVTLLLITSSAEELGSFEQTHQGWLLLLVHAFIRDWYSCFGRGDMAVGQIFIMIKVSTHRGWADTMVRLLLSDHEVTCSNSGDSVSTLWGIIDSVVTLSMGMCQVQLGQVKNQARRRGCAQRTAPHPTLEEKLRM 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0835 413 CDD SNARE_Qc 229 281 - -
Lal3g0835 413 PANTHER SYNTAXIN 86 286 IPR045242 -
Lal3g0835 413 Gene3D - 228 282 - -
Lal3g0835 413 PANTHER SYNTAXIN-51-LIKE 86 286 - -
Lal3g0835 413 SUPERFAMILY SNARE fusion complex 218 281 - -
Lal3g0835 413 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 226 288 IPR000727 -
Lal3g0835 413 MobiDBLite consensus disorder prediction 394 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0835 Lal-Chr3 7606357 7612431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0835 94 279 SNARE and Associated Proteins AT1G16240 74.074 3.05e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0835 K08503 - gmx:100794038 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0835 3 7606357 7612431 Lal3g0835 3 7606357 7612431 ECH
Lal3g0835 3 7606357 7612431 Lal11g0714 11 6994682 6998600 LSH
Lal3g0835 3 7606357 7612431 Lal18g1593 18 17452477 17454375 PCT
Lal18g1593 18 17452477 17454375 Lal3g0835 3 7606357 7612431 PCT