Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0816 ATGTCTCCGGCGAAGCTTCCGATCACGAGGCCACCGTGCGTATCGGTTGCGCCGATGCTCAGTCCGACGTCGTTTCTAGAGTCCCCGGTTCTTCTCTCTAATATGAAGGTGGAGCCTTCACCAACTACAGGGTCCCTTCCTAAGCTTAATCAAACAGCACATGGTTCTGTGACTTATGCCGTTGATGACAGAAAAGCAAGCTTCTTTGAGTTCAAACCAGACAGTAGATCAAACACGGGTCCTACTGACTTTGGTAACCACGTAAGTGAAAAATCTACTCAAATAGAAGGCCAAGGAAAAGCTCAATCTTCAGCCTCACCTCTTTTAGTAAAAAATGAGATAGCAGTCCCTTCAAATGAATTAAGTCTATCATCACCAGGGACTAGTTCTCATGTTGAAGTCGATTTGGAAGAATTCAACAACTGGGGCAACACAGGCACTGGGCTTCAAGCATCAAAAATCGAGGGTAGGGGCACTGGACTCTCAGTTACACCCGAGAGAGTATCTGATGATGGATACAATTGGCGAAAATATGGGCAGAAACATGTTAAAGGAAGTCAATTTCCACGGAGTTATTACAAATGTACGCATCCTAACTGTGAAGTGAAGAAACTATTTGAACGCTCCCATGATGGGCAAATCACTGAAATAGTGTACAAGGGAATGCATGATCATCCTAAACCTCAACCAAGTCGCCGATACTCTGCTGGAACTACTATGTCTATACATGAAGAGAGATGTGACAAGGCTTCTTGTTTAACTGGCCGAGATGAGAAAGCATCTGGCCACGTGTCTCACACTGCTGAACCCAACAGTACTCCGGAGCTATCACCTGTAGCAACAAATGATGACAGTCCAGAGGTTGCAGGGTTTGTGTCAAACCGAATTAATGACGAGGTTGATGATGACGATCCCTTCTCAAAGAGAAGAAAAATGGCTCTCGGAAATACTGACATCACTCCTGTCATTAAGCCAATCCGGGAACCACGGGTTGTTGTTCAAACCTTGAGTGAGGTTGATATATTGGATGATGGGTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCCAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCGGTCAGAAAACACGTGGAGAGGGCGTCCCATGATCCGAAAGCTGTGATAACCACATATGAGGGCAAACACAATCATGATGTACCAGCTGCGAAAAATAGTATCCATGACATGGCAGGACCATCTGGTGCAGGTGGACATGCAAGATTTAGGCCAGAAGAAAGTGATACTATTAGCCTTGACCTTGGGATGGGCATTAGCGCAGCTTCTGAAAATAGATCGAACGAGCAACGGAGATTGGTGCTTTCTGAATATGGGAACAGTCAAACTCACACCGGAAATTCCAATTTCAAGTTTGTTCATGCTGCCGAAGCTCCAGTGTACTTTGGTGTCCTAAATAACAGCTCAAATCCATATGGCTCAAGAGAAAGTTTGAGTGATAGTCCATCCTCAAGTCATTCTGCTTATCGTTGCCCACAAAACAGTGGAAGAATACTAACTGGTCCATAA 1569 0.4532 MSPAKLPITRPPCVSVAPMLSPTSFLESPVLLSNMKVEPSPTTGSLPKLNQTAHGSVTYAVDDRKASFFEFKPDSRSNTGPTDFGNHVSEKSTQIEGQGKAQSSASPLLVKNEIAVPSNELSLSSPGTSSHVEVDLEEFNNWGNTGTGLQASKIEGRGTGLSVTPERVSDDGYNWRKYGQKHVKGSQFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGMHDHPKPQPSRRYSAGTTMSIHEERCDKASCLTGRDEKASGHVSHTAEPNSTPELSPVATNDDSPEVAGFVSNRINDEVDDDDPFSKRRKMALGNTDITPVIKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNSIHDMAGPSGAGGHARFRPEESDTISLDLGMGISAASENRSNEQRRLVLSEYGNSQTHTGNSNFKFVHAAEAPVYFGVLNNSSNPYGSRESLSDSPSSSHSAYRCPQNSGRILTGP 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0816 522 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 501 - -
Lal3g0816 522 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 SUPERFAMILY WRKY DNA-binding domain 166 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 MobiDBLite consensus disorder prediction 220 240 - -
Lal3g0816 522 MobiDBLite consensus disorder prediction 71 106 - -
Lal3g0816 522 Gene3D WRKY domain 162 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 Gene3D WRKY domain 327 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 ProSiteProfiles WRKY domain profile. 164 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 MobiDBLite consensus disorder prediction 492 522 - -
Lal3g0816 522 MobiDBLite consensus disorder prediction 72 106 - -
Lal3g0816 522 MobiDBLite consensus disorder prediction 254 287 - -
Lal3g0816 522 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 MobiDBLite consensus disorder prediction 265 280 - -
Lal3g0816 522 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 SMART WRKY_cls 169 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0816 522 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 501 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0816 Lal-Chr3 7424891 7432952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0816 1 522 WRKY Transcription Factor Family AT4G26640 54.212 5.27e-179 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal3g0816 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0816 - - gmx:100781491 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0816 3 7424891 7432952 Lal3g0816 3 7424891 7432952 ECH
Lal3g0816 3 7424891 7432952 Lal18g1604 18 17518395 17523174 LSH
Lal3g0816 3 7424891 7432952 Lal18g1604 18 17518395 17523174 PCT
Lal3g0816 3 7424891 7432952 Lal6g0048 6 300965 306779 PCT
Lal18g1604 18 17518395 17523174 Lal3g0816 3 7424891 7432952 PCT
Lal6g0048 6 300965 306779 Lal3g0816 3 7424891 7432952 PCT