Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0812 ATGAACACACCTGCTGGGATTCAAAGTCAGGCACCCCTGTTGCCAAACAATGTAACTACCGTCTGGAGCTTGTTGTGCTTGTGCAAATCACATCAAGGTTTCCAAAGTATCCTGAATGAGATTCGCGGTTCATCCCATTTGCATCCAATATACTTAGATTGGTGGGGCGAATCGAACCTAAAGTATGTGTTGTGTGTTGTTCTTGTCAATAGAGAAACTCTTTTATCTCTTTCCCTTCCTTTCTATGCTCTTCCATTATTAAACCAAAAGACAAGGAAAGAAGTGGAAAGAGGAATAAAGATTGATGTTAACGGGTATTCTTTGAACAATATGGCTACACATGCTCCACTTCAAGAAGCCCTTTTGAAAGGTGGCTCTAGTGTAAGAAATAATTTTGATCCTGACAAGACTAGAGCAAATGAAAAATTAAACTGTTATTCAAATGCTGGATTTTTCAGTATTCTAACTTTTTCATGGATGAGTACACTAATAGCTCTAGGCAATAGAAAGACTTTAGACCTTGAGGACCTCCCACTGCTTCCGATCATCGATAGTGCCTATGGGACTTTTCCGACTTTTAGGAACAAGCTTGAGTCAGAGTGTGTTGGTGTTAGTAAAGTGACTACTCTTAAGCTTGCGAAAGCGCTGTTCTTCTCAACATGGCCAGGAATCCTTTTATCAGGCTTATTTGGACTCTTATACACATGTGCTTCTTATGTTGGCCCTTATCTTATTGACATACTTGTTCAATACCTTAATGGAGAGCAAAAGTTCAAAAATGAAGGCTATATTTTGGCATTGGCATTTGTTGCAGCGAAGCTTGTGGAGTGCCTTTCACAGAGGCACTGGATGTTTAGATTCCAGCAGGTTGGGGTTAGGATGCAATCAATGTTGGTTTCGATGATCTACGCTAAAGGTTTGACCCTTTCATCTCAATCAAAGGAGAATCACAGTAGTGGGGAAATCATCAACTTATTGACTGTAGATGCTGCAAGGATCGGTGAATTTTGTTGGTACATGCATGATCCATGGATGGCTGTTCTTCAGGTTGCTTTGGCTTTGATAATTCTCTACCGAACTGTCGGGATTGCTTCACTAGCTGCTTTTGGTGCCACTGTAATTATAATGTTGCTGAACCTGCCTCTGGCATCTTTGCAAGAAAAGTTCCAACATAAGTTAATGCAATTTAAAGATGAAAGAATGAAGATGACGTCTGAGATTTTAAAGAACATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTACTTTTCAAAGATTGTTGAGATTAGGAAGAATGAGGAGACATGGATAAAGAAATTTGTGTTTGGTTCCACAATTGTTAGATTTCTCTTCTTTAATGCCCCAACTTTTGTTGCTGTGGTTACTTTTGGCGCTTGTGTTCTTATAGGCATACCACTTGAATCAGGGAAGATCTTATCTGCACTTGCAACATTCCGTATTCTTCAAATGCCAATCTATAATCTTCCTGACACTCTTTCAATGATTGCCGAAACTAAGGTTTCCCTGGATAGGATTGCAGCATTCCTCTCTCTCAATGACTTGCAGACTGATGTAGTGGAGAAGCTTCCACGGGGTAGTTCGGATACAGCAATTGAGATAGTCGAAGGAAATTTCTCTTGGGGTTTATCTTCACCTGATATAACATTAAAAAACATAAATCTAACTGTTTCTCATGGCATGAGGGTTGCTGTTTGTGGTACCGTTGGATCAGGCAAGTCTAGTTTGCTTTCTTGCATAATAGGGGAAGTACCGAAGCTATCTGGGATCGTTAAAGTTTGTGGAACAAAGGCTTATGTCGCTCAATCACCATGGATACAGAGCGGCAAGATCGAAGAGAACATATTATTTGGTAAAAATATGGACAGGGAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGACAAAAGACTTAGAGGTTCTACCATTTGGTGATCAGACCATTGTCGGAGAGAAGGGAATCAATTTGAGTGGCGGGCAGAAGCAAAGAGTACAAATAGCTCGCGCTCTTTACCAAGACGCTGATATATATCTGTTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCCCACCTCTTTAAGGAGTGTTTGCTTGGCCTTTTGAAAACAAAAACTGTGATATACATCACTCATCAAGTAGAGTTTTTACCTGATGCTGATCTAATATTGGTAATGAGAGATGGAAGGATAACTCAATCAGGAAAATATAATGTCATTCTCAAGTCAGACACTGATTTTATGGAACTTGTAGGTGCACATAAAGCAGCTCTGTCTTCAATTAAGTCCTTCGAGAAAAGGCTGACTTCGAAAACATCGAGTTTCACCGTGGAGGAAACAGATTCATTAAGTGTTTTTGGACTTGATCAAAAAGTGGAACACATACATGATCAAAATGACAAATCAGATGATATGGTTGAACCGAAAGGCCAACTTGTTCAAGAAGAGGAACGAGAAAAAGGTAGAGTTGGGTTTAAAGTCTACTGGAGTTACATGACATCTGCTTATGGTGGAGCTCTTGTACCTTTCATATTACTTTCACAGATACTCACCACAACTTTGCAAATTGCTAGCAATTTTTGGATGGCTTTGGCAACTCCTGTTTCAGCAACTGCAAAACCTGCTATTGGAAGCTTTACACTTATGGTTGTCTATGTTGCTTTGGCAATAGGAAGTTCATTTGGCACACTTGCTAGATCCATGCTTTCTGCGATCGCTGGATACAAGACATCCACCTTGCTCTTCAATAAAATGCATTTAAGCTTTTTTCGAGCACCAATGTCGTTTTATGATGCTACCCCAAGCGGGCGAATCCTTAATAGAGCTTCAAATGACCAAAGTGCATTAGATATGAGCATTGCAAATCTAATGTGGGGATTTCCCTTCAATCTAACTCAGCTCTTTGGAAATATTGCTGTGATGTCTCAAGCTGCATGGCAAGTGTTTATAGTGCTGATTCCTGTTTTAGCAGCCTGCATATGTTACCAGCGATACTACTCATCATCAGCGCGGGAATTGGCACGATTAGTTGGTATATGTGAAGCTCCAGTAATACAGCACTTTTCTGAAACCATTTCTGGATCAACAACCATAAGATGTTTTGAGCAAGAATCAAGATTCAATGACACAAATATGAAATTGATAGACAGATATTCCCAGCCGAAATTATACAGTGCTAGTGCAATGGAATGGTTGTCTTTCCGATTGGATATTTTATCCACTATAACATTTGCCTTCTGTTTGGTTTTCTTGGTATCTTTTCCAAATTCAATTACTGTTCCTGGCATTGCGGGATTGGCTGTGACGTATGCGCTTAATCTAAATGCAACACAATTTAGTTTAATTTGGAATCTTTGCAATCTGGAGAACAAAATCATATCAGTGGAAAGAATATTTCAGTACACTAGCATCCCAAGTGAGCCTCCTCTTGTAATCAAAGATAGCCAACCAGATCATTCTTGGCCATCATTCGGAGAGATTCATATCCACGATTTACAGGTTCGGTATGCTCCTCAGCTGCCTCTCGTTTTACGTGGTATGACTTGCACTTTTACGGCTGGAGCAAAAACAGGCATTGTGGGCAGGACAGGAAGTGGAAAATCAACTCTAGTGCAAACACTTTTCCGACTTGTTGAACCTGTTGCTGGACAAATATTGATAGACAACATCAACATCGCTTCGATTGGAATTCATGATTTACGGTCGAAACTAAGCATAATCCCTCAGGATCCAACAATGTTTCAAGGAACTATAAGAAGCAACCTGGACCCACTGGAAGAGTATACAGATGAACGGATTTGGGAGGCTCTAGACATGTGCCAGCTTGGAGATGAAGTAAGGAATAAAGAAGGGAAACTTGACTCTAAAGTTACTGAGAATGGAGAAAATTGGAGCATGGGTCAAAGGCAATTGGTATGCCTCGGGCGCGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTTGACGAAGCTACCGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAATACTTAAGCAATACTTTTCAGAATGCACAGTCATTACCATTGCTCATAGAATAACTTCAATCATTGATAGTGACATGGTTTTGTTTCTAAATCAAGGGCTTATTGAGGAATATGATTCCCCCAAGAAACTACTTAAGAACAAATATTCAGCTGTTTCTCAACTAGTTGCAGAATACACACGGAGGTCAAACTCTGGATTTGAAAGTTAA 4248 0.4002 MNTPAGIQSQAPLLPNNVTTVWSLLCLCKSHQGFQSILNEIRGSSHLHPIYLDWWGESNLKYVLCVVLVNRETLLSLSLPFYALPLLNQKTRKEVERGIKIDVNGYSLNNMATHAPLQEALLKGGSSVRNNFDPDKTRANEKLNCYSNAGFFSILTFSWMSTLIALGNRKTLDLEDLPLLPIIDSAYGTFPTFRNKLESECVGVSKVTTLKLAKALFFSTWPGILLSGLFGLLYTCASYVGPYLIDILVQYLNGEQKFKNEGYILALAFVAAKLVECLSQRHWMFRFQQVGVRMQSMLVSMIYAKGLTLSSQSKENHSSGEIINLLTVDAARIGEFCWYMHDPWMAVLQVALALIILYRTVGIASLAAFGATVIIMLLNLPLASLQEKFQHKLMQFKDERMKMTSEILKNMRILKLQAWEMKYFSKIVEIRKNEETWIKKFVFGSTIVRFLFFNAPTFVAVVTFGACVLIGIPLESGKILSALATFRILQMPIYNLPDTLSMIAETKVSLDRIAAFLSLNDLQTDVVEKLPRGSSDTAIEIVEGNFSWGLSSPDITLKNINLTVSHGMRVAVCGTVGSGKSSLLSCIIGEVPKLSGIVKVCGTKAYVAQSPWIQSGKIEENILFGKNMDREKYEKVLEACSLTKDLEVLPFGDQTIVGEKGINLSGGQKQRVQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLKTKTVIYITHQVEFLPDADLILVMRDGRITQSGKYNVILKSDTDFMELVGAHKAALSSIKSFEKRLTSKTSSFTVEETDSLSVFGLDQKVEHIHDQNDKSDDMVEPKGQLVQEEEREKGRVGFKVYWSYMTSAYGGALVPFILLSQILTTTLQIASNFWMALATPVSATAKPAIGSFTLMVVYVALAIGSSFGTLARSMLSAIAGYKTSTLLFNKMHLSFFRAPMSFYDATPSGRILNRASNDQSALDMSIANLMWGFPFNLTQLFGNIAVMSQAAWQVFIVLIPVLAACICYQRYYSSSARELARLVGICEAPVIQHFSETISGSTTIRCFEQESRFNDTNMKLIDRYSQPKLYSASAMEWLSFRLDILSTITFAFCLVFLVSFPNSITVPGIAGLAVTYALNLNATQFSLIWNLCNLENKIISVERIFQYTSIPSEPPLVIKDSQPDHSWPSFGEIHIHDLQVRYAPQLPLVLRGMTCTFTAGAKTGIVGRTGSGKSTLVQTLFRLVEPVAGQILIDNINIASIGIHDLRSKLSIIPQDPTMFQGTIRSNLDPLEEYTDERIWEALDMCQLGDEVRNKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQILKQYFSECTVITIAHRITSIIDSDMVLFLNQGLIEEYDSPKKLLKNKYSAVSQLVAEYTRRSNSGFES 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0812 1415 Gene3D ABC transporter type 1, transmembrane domain 814 1150 IPR036640 GO:0005524|GO:0016021
Lal3g0812 1415 Gene3D ABC transporter type 1, transmembrane domain 203 517 IPR036640 GO:0005524|GO:0016021
Lal3g0812 1415 SUPERFAMILY ABC transporter transmembrane region 216 513 IPR036640 GO:0005524|GO:0016021
Lal3g0812 1415 Gene3D - 1152 1405 IPR027417 -
Lal3g0812 1415 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 539 762 IPR003439 GO:0005524
Lal3g0812 1415 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 852 1132 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0812 1415 SMART AAA_5 566 739 IPR003593 -
Lal3g0812 1415 SMART AAA_5 1195 1380 IPR003593 -
Lal3g0812 1415 Gene3D - 518 785 IPR027417 -
Lal3g0812 1415 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 225 505 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0812 1415 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 115 1414 - -
Lal3g0812 1415 CDD ABCC_MRP_domain1 539 739 - -
Lal3g0812 1415 SUPERFAMILY ABC transporter transmembrane region 850 1151 IPR036640 GO:0005524|GO:0016021
Lal3g0812 1415 CDD ABC_6TM_ABCC_D2 850 1144 IPR044726 GO:0140359
Lal3g0812 1415 CDD ABCC_MRP_domain2 1167 1387 - -
Lal3g0812 1415 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 115 1414 - -
Lal3g0812 1415 CDD ABC_6TM_ABCC_D1 226 513 IPR044746 GO:0140359
Lal3g0812 1415 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1169 1403 IPR003439 GO:0005524
Lal3g0812 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1161 1394 IPR027417 -
Lal3g0812 1415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 539 761 IPR027417 -
Lal3g0812 1415 Pfam ABC transporter transmembrane region 852 1095 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0812 1415 Pfam ABC transporter transmembrane region 225 492 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal3g0812 1415 Pfam ABC transporter 1186 1334 IPR003439 GO:0005524
Lal3g0812 1415 Pfam ABC transporter 557 691 IPR003439 GO:0005524
Lal3g0812 1415 ProSitePatterns ABC transporters family signature. 664 678 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0812 Lal-Chr3 7394130 7401893 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0812 443 785 Calmodulin-binding Proteins AT2G36910 27.174 6.69e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0812 - K05666 gmx:106794105 2070.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0812 3 7394130 7401893 Lal3g0812 3 7394130 7401893 ECH