Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0759 ATGCCTAGAAGCTTAAGGAATCTGTTACTTTATCCAAAAATCTTATACCTTACTTTGCTTTTATCATTGAACTCTATTTTCTTCACATGTTGCTACTCACTTAATGAACAAGGTCAAGCTCTTTTAGCATGGAAAAACAGTTTAAATAGTACTCAAGATGCATTAGCATCATGGAACACTTTAGCTACAAGCCCATGCAACTGGTTTGGTGTGCATTGCAACTCACAAGAAGATGTTGTTGAGATAAAGCTCAAGTCAGTGAATTTGCAAGGTTCATTACCTTTATATTCTCAATCTCTTATGTTGTCCTTGAAGATTCTTATCCTCTCTTCAACCAACATCACAGGCAAGATTCCAAAAGATATTGGAGAATATCAAGAACTTATCTTTATTGATCTCAGTGGAAATTCTCTAACAGGTGAAATCCCTGAAGATATTTGCAGGCTAAGAAAACTGCAAAGTTTGTCTCTTCATACAAACTTTCTTGAAGGCAATGTTCCATCAAATATAGGAAATGTATCAAGTCTAGTGAACTTGACACTCTATGACAATAAACTCAGTGGTGAAATCCCAAAGAGTATTGGATCATTAAGGAAGTTACAAGTATTCAGAGCAGGTGGCAATAAGAACCTTAAGGGTGAGTTACCATGGGAAATTGGAAACTGCACCAACTTGATCACGTTAGGCCTTGCCGAAACCAGCATTTCCGGGCGTCTTCCTTCTTCAATTGGAATGCTGAAAATAATTCACACCATAGCCATTTACACAACTCTATTATCAGGCCCTATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACCTGTACCTGTACCAGAACTCAATATCAGGTTCAATTCCTATCCAAATTGGAGAACTTGGCAAGCTTAAGAGTCTACTTTTATGGCAAAACAATATAGTTGGTACAATCCCTGAAGAGCTTGGAAGCTGCAGAGAGATTAAAGTCATAGACTTATCCGAAAATCTCCTTACAGGAAGCATACCAAGGAGTTTTGGTCATCTTCCAAATTTGAAAGAACTTCAATTGAGTTCCAATCAGCTCTCAGGTACTATACCTCCTGAAATTACAAAGTGTACTTCTCTGACTCAGCTGGAACTTGACAACAATTCTCTAACCGGCGAAATTCCTGATCTTATTGGTAACTTGAGAAGTTTGAATTTGTTCTATGCTTGGCAGAACAATCTAACAGGAAAAATTCCTGGTAGCCTTTCGGAGTGTCAAGAACTTCAGGCACTTGATCTCTCTTACAACAACTTGATTGGGTCAATACCCAAACAACTATTCGGGTTGAAGAATCTCACCAAATTTCTCCTTCTTTCAAATGATTTATCAGGCTTCATACCACCTGATATAGGTAACTGCACGAGTCTCTACCGGCTGCGTTTGGATCACAATAGACTAGAAGGTAACATTCCACCCGAGATAGGAAACTTGAAGAATTTGAATTTTGTTGATATGAGCAACAATCATCTTGTAGGGGAGATTCCTGCAGCACTATCTGGATGCCAGAATCTTGAGTTTTTAGACCTTCATTTGAATAGTCTAACCGGTTTGGTTCCGTATTCTCTTCCCGAAAGCCTGAAGTTAATTGACTTCTCAAGCAACAGGCTAGATGGTCCATTGAGTCCTAAAATTGGTGCATTGGTTGAGTTAACGAAACTCAACCTCGGAAAGAATCAACTCAGTGGTAGAATCCCAGCAGAGATCCTATCTTGCACTAAGCTACAACTTCTAGATTTAGGAAGGAATAGTTTCTCTGGAGAAATACCAAAGGAGGTTGGTCTAAGTCCTTCACTAGAAATCTCTCTCAATCTTAGCTGCAACCAGTTTTCTGGTCAAATTCCAACCCAATTCTCTAGTCTTACCAAACTTGGAGTCCTTGATCTTTCACACAACATGCTCTCAGGGAATTTAGATTCTCTCTCTGACCTTGAGAATCTTGTTTCTTTAAATGTTTCATTCAATGGCTTCTCCGGTGAGTTGCCTAACACACCGTTTTTCCATAAACTATCTCTCAGTGACCTTGCCGAAAATCAAGGTCTCTACATTGCTGGTGGTCTTGAAACTCATGCTTACAGAATGGGATCTAAAGATCATGCATGGTCAGCTTTGAAGTTCACAATGTCTATTCTCTTAAGCACTGGCGCGGTACTAGTGCTGCTCACAATCTATCTCTTCATTCGCGCTCATATCTCCAACAAAGTGCTAATGGGAAATGAGGGTTGGGAAATGACTTTGTATCAGAAGTTTGAATTGTCCATTGATGACATTGTCCTGAATTTTACATCAGCCAATGTGGTTGGCACAGGAAGCTCTGGAGTAGTGTACAAGGTAACAACTCGGGACGGAAAAACGATAGCAGTAAAAAAGATGTGGTCATCAGAAGAGTCCGGAGCATTCAATTCTGAGATTCAAACACTTGGTTCAATCAGGCACAAGAATATCATTAGGCTGCTAGGTTGGGGATCAAATAGGAACTTGAAGCTGCTGTTTTATGACTACCTACCTAATGGAAGCCTGAGCTCACTACTTCACGGCTCGGAAAAGGGGAAAGCAGAATGGGAGATAAGATATGATGTTATCTTAGGTGTGGCTCATGCACTTTCTTATTTGCACCATGATTGTTTGCCTGCTATAATGCATGGCGATGTCAAAGCGATGAATGTCTTATTAGGCCCTGGCTATCAACCATACCTTGCCGACTTTGGCCTGGCGAGAATCGCAAGTGAAAAAAATCACAATACTAATTCCAATCCAGTTCAAAGACATTACCTTGCTGGTTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAGCCTATAACTGAGAAAAGTGATGTGTATGGTTATGGTGTGGTTCTACTTGAGGTCCTGACCGGGCTGCACCCATTAGACCCAACATTACCCGGCGGCGCACACTTGGTTCAAGGGGTTAGGAACCATTTAGCTAGCAAAGGAGAGCCATCGGACATTCTTGACCCAAAACTGAGAGGGAAGGCTGACCCTACAATGCATGAAATGCTACAAACACTAGCAGTATCATTCCTATGTCTCAGCACCATAGCCAAAGACCGTCCCTCGATGAAGGATATTGTTGCAATGCTCAAGGAAATTAGGCCTATTGAGTCCTCAAGGGCAGATGATGATGTGCTGAAGGGTGGTTTAACAGAACATAATTCTCCATCACCTCATAAGAATGTAGTTTCACATGGATCTTCTAACTGTTCCTATAATTTCTCAGATGATTCAATCAGTTAA 3285 0.4073 MPRSLRNLLLYPKILYLTLLLSLNSIFFTCCYSLNEQGQALLAWKNSLNSTQDALASWNTLATSPCNWFGVHCNSQEDVVEIKLKSVNLQGSLPLYSQSLMLSLKILILSSTNITGKIPKDIGEYQELIFIDLSGNSLTGEIPEDICRLRKLQSLSLHTNFLEGNVPSNIGNVSSLVNLTLYDNKLSGEIPKSIGSLRKLQVFRAGGNKNLKGELPWEIGNCTNLITLGLAETSISGRLPSSIGMLKIIHTIAIYTTLLSGPIPEEIGNCSELQNLYLYQNSISGSIPIQIGELGKLKSLLLWQNNIVGTIPEELGSCREIKVIDLSENLLTGSIPRSFGHLPNLKELQLSSNQLSGTIPPEITKCTSLTQLELDNNSLTGEIPDLIGNLRSLNLFYAWQNNLTGKIPGSLSECQELQALDLSYNNLIGSIPKQLFGLKNLTKFLLLSNDLSGFIPPDIGNCTSLYRLRLDHNRLEGNIPPEIGNLKNLNFVDMSNNHLVGEIPAALSGCQNLEFLDLHLNSLTGLVPYSLPESLKLIDFSSNRLDGPLSPKIGALVELTKLNLGKNQLSGRIPAEILSCTKLQLLDLGRNSFSGEIPKEVGLSPSLEISLNLSCNQFSGQIPTQFSSLTKLGVLDLSHNMLSGNLDSLSDLENLVSLNVSFNGFSGELPNTPFFHKLSLSDLAENQGLYIAGGLETHAYRMGSKDHAWSALKFTMSILLSTGAVLVLLTIYLFIRAHISNKVLMGNEGWEMTLYQKFELSIDDIVLNFTSANVVGTGSSGVVYKVTTRDGKTIAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSEKGKAEWEIRYDVILGVAHALSYLHHDCLPAIMHGDVKAMNVLLGPGYQPYLADFGLARIASEKNHNTNSNPVQRHYLAGSYGYMAPEHASMQPITEKSDVYGYGVVLLEVLTGLHPLDPTLPGGAHLVQGVRNHLASKGEPSDILDPKLRGKADPTMHEMLQTLAVSFLCLSTIAKDRPSMKDIVAMLKEIRPIESSRADDDVLKGGLTEHNSPSPHKNVVSHGSSNCSYNFSDDSIS 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0759 1094 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524
Lal3g0759 1094 Pfam Protein kinase domain 771 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0759 1094 SUPERFAMILY RNI-like 455 682 - -
Lal3g0759 1094 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1060 - -
Lal3g0759 1094 SUPERFAMILY L domain-like 294 529 - -
Lal3g0759 1094 Gene3D Ribonuclease Inhibitor 335 430 IPR032675 -
Lal3g0759 1094 Gene3D Ribonuclease Inhibitor 609 694 IPR032675 -
Lal3g0759 1094 Gene3D Ribonuclease Inhibitor 431 532 IPR032675 -
Lal3g0759 1094 SMART serkin_6 769 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0759 1094 SUPERFAMILY L domain-like 32 318 - -
Lal3g0759 1094 Gene3D Ribonuclease Inhibitor 101 334 IPR032675 -
Lal3g0759 1094 Gene3D Ribonuclease Inhibitor 31 100 IPR032675 -
Lal3g0759 1094 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1060 - -
Lal3g0759 1094 ProSiteProfiles Protein kinase domain profile. 769 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0759 1094 MobiDBLite consensus disorder prediction 1060 1081 - -
Lal3g0759 1094 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Lal3g0759 1094 Pfam Leucine rich repeat 296 355 IPR001611 GO:0005515
Lal3g0759 1094 Pfam Leucine rich repeat 610 664 IPR001611 GO:0005515
Lal3g0759 1094 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Lal3g0759 1094 ProSitePatterns Serine/Threonine protein kinases active-site signature. 887 899 IPR008271 GO:0004672|GO:0006468
Lal3g0759 1094 Gene3D Transferase(Phosphotransferase) domain 1 843 1062 - -
Lal3g0759 1094 Gene3D Ribonuclease Inhibitor 533 608 IPR032675 -
Lal3g0759 1094 SUPERFAMILY Protein kinase-like (PK-like) 765 1050 IPR011009 -
Lal3g0759 1094 Gene3D Phosphorylase Kinase; domain 1 747 842 - -
Lal3g0759 1094 SMART LRR_typ_2 342 366 IPR003591 -
Lal3g0759 1094 SMART LRR_typ_2 294 318 IPR003591 -
Lal3g0759 1094 SMART LRR_typ_2 556 580 IPR003591 -
Lal3g0759 1094 SMART LRR_typ_2 414 438 IPR003591 -
Lal3g0759 1094 SMART LRR_typ_2 629 652 IPR003591 -
Lal3g0759 1094 SMART LRR_typ_2 149 173 IPR003591 -
Lal3g0759 1094 SMART LRR_typ_2 486 510 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0759 Lal-Chr3 6560482 6566284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0759 31 1093 Receptor kinase-like Gene Family AT5G56040 65.640 0.0 1387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal3g0759 Pkinase 9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0759 - - gmx:100792943 1748.41