Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0750 ATGATGGAGAATCAACTTGAAAACCCAAATCTGATTGCATCTGGATCTTTAGATGACTTGTCTAGGACTTGCAAGATGAATTCTCCAAATGCAAGGGCAATGCACAAGTCTGAGGACGAAGTTCCCTTTGGCCGCGAAATAGCTTTTCACCAGTCAGAATCTACTGTAGTGGATGTACATGGATCACATTCTAGAGTATTACAGGCTGCTCATAATGAAACATTGGCAGCTATTATTTATAGGAGCATACAAGTTGTAGTTTTCTCTAACAGATTCAACTTGCTTATCCCTTTTGGGCCTCTCGCAATTCTTGTAGAGAAATTGACTGATCATCATGGATGGGTATTCGCTTTGAGTTTGTTGGGTATAATGCCTCTGGCGGAGCGGTTAGGTTATGCTACAGAGCAGCTGGCATTTTACACTGGAGATACTGTTGGGGGTCTCTTAAACGCCACATTTGGTAATGCAACAGAATTGATCATCTCATTATATGCTCTGAAAAGTGGATTGATACGAATTGTCCAGCTTTCTTTGCTGGGCTCAATTTTGTCAAATATGTTGCTGGTACTTGGATGTGCATTCTTATGTGGTGGGATTGTTTTTCATAAGAAGGAACAAGTGTTTAACAAGGCAGCTGCTACTGTGAATTCAGGATTGTTGCTGATGGCAGTCATGGGACTACTTTTTCCTGCTGTTCTTCATTACACACACACTGAGATGCATTTTGGGAAGTCAGAGTTGGCGCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACCTCTTTTTCCAATTGAAAAGTCAAAAAAGTCTTTATGTTTCTGTAAATGAGGACGAGATTCAAACTGGAAACAACTCAAACAATGATGAATCTCCGGATATTTCTAAATGGGAATCAATAATATGGCTTTCAGTTTTGACTGCTTGGATATCAATCCTGTCAGAATACTTGGTTGGCGCTATAGAGGGAGCATCTACTTCATGGAACATTCCAGTAGCTTTTATTAGTGTCATATTGCTTCCACTGGTGGGGAACGCGGCAGAACATGGCAGTGCTATCATGTTTGCCATGAAGGATAAACTTGACATTTCCTTAGGAGTAGCAATAGGGTCATCGACGCAAATATCTATGTTTCTGATACCATTTTGTGTGGTTGTTGCCTGGATTATGGGGATTCCTATGGACTTAAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTAACTGTTATAGTTGTAGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTAGTTCTTTGCTATCTAATAGTGGCAGCTAGTTTTTATGTACATGTAGATTCTCAACCAGTAGATTAG 1368 0.4028 MMENQLENPNLIASGSLDDLSRTCKMNSPNARAMHKSEDEVPFGREIAFHQSESTVVDVHGSHSRVLQAAHNETLAAIIYRSIQVVVFSNRFNLLIPFGPLAILVEKLTDHHGWVFALSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISLYALKSGLIRIVQLSLLGSILSNMLLVLGCAFLCGGIVFHKKEQVFNKAAATVNSGLLLMAVMGLLFPAVLHYTHTEMHFGKSELALSRFSSCVMLVAYAAYLFFQLKSQKSLYVSVNEDEIQTGNNSNNDESPDISKWESIIWLSVLTAWISILSEYLVGAIEGASTSWNIPVAFISVILLPLVGNAAEHGSAIMFAMKDKLDISLGVAIGSSTQISMFLIPFCVVVAWIMGIPMDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGLMLVLCYLIVAASFYVHVDSQPVD 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0750 455 Pfam Sodium/calcium exchanger protein 114 269 IPR004837 GO:0016021|GO:0055085
Lal3g0750 455 Pfam Sodium/calcium exchanger protein 304 444 IPR004837 GO:0016021|GO:0055085
Lal3g0750 455 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 28 453 - -
Lal3g0750 455 Gene3D - 141 286 IPR044880 -
Lal3g0750 455 Gene3D - 288 447 IPR044880 -
Lal3g0750 455 TIGRFAM cax: calcium/proton exchanger 95 446 IPR004798 GO:0006816|GO:0015369
Lal3g0750 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 28 453 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lal3g0750 455 TIGRFAM caca2: calcium/proton exchanger 82 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0750 Lal-Chr3 6451956 6465071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0750 38 455 Antiporters AT1G55730 70.096 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0750 K07300 - gmx:100799276 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0750 3 6451956 6465071 Lal3g0750 3 6451956 6465071 ECH