Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0737 ATGCAGATGAAGAAAACAACAGGCCCTAGTTTGAATCAGCATAACCAAAGAAAGAGGAATTCTGGTTTCCAAGATAAGGGTGCAAGCAATGGCACAAGGAGCCATAATGTTAAGAATCATATTGTTCTGACATATTTAAAGTCTTATGTCAGAAAATGTGTAGGTTTGTTTCTCCCTGGGAAAAGAAAAACAGGCTCACAAGTTGTTGAAAATGATGACAAGAAGAATGCAGACAAAGTCAGAGAGTTATCATCTTCAACAGATTTATCATCTAATAATAGTAACAAGGGTACATCAAAATCAAATTTTTCTCATTCCTATGCATCATCTAGCAGTTCAAGTAATCAGATTGGACCTGGAAACTTCTCATTTGAAGAAATTTACAAGGCAACATCAAAATTCTCTCTAGATAATAAGATTGGAGAAGGTGGTTTTGGAACAGTATATAAGGGAAAACTTACTAATGGACCTCTTGTGGCTGTAAAGCGCGCCAAGAAGGATGTACAAAACAAGCACTTATATGAGTTCAAGAATGAAATATACACACTGTCAAGAGTTGAGCACCTGAATCTTGTGAGGTTGTATGGTTATTTGGAGCATGGACAAGAGAAGATTATTGTTGTTGAGTATGTAAACAATGGAACACTTCGGGAACACTTAGATGGTACGCGAGGACAAGGACTAGAAATCGGAGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAGTTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAACATTTTAATCACTGACAATCTTAGGGCCAAAGTGGCCGACTTCGGTTTCGCTCGGCTGGCTACAATAGACCCGGATAAAACCCATATTTCAACTCAAGTTAAAGGAACAGCAGGATATGTAGATCCTGATTACATGCGAACGCATCACCTTACCGAAAAGAGTGATGTATATTCATTTGGAGTGTTGCTTGTTGAAATGATCACAGGACGACATCCAATTGAACCTCAGAGACAACTCAACGAGAGAGTGACAATTAGATGGGTAAGCATATCAGAACTCATAAAAGCTTTACAAAAAGATCTACAATAG 1101 0.3797 MQMKKTTGPSLNQHNQRKRNSGFQDKGASNGTRSHNVKNHIVLTYLKSYVRKCVGLFLPGKRKTGSQVVENDDKKNADKVRELSSSTDLSSNNSNKGTSKSNFSHSYASSSSSSNQIGPGNFSFEEIYKATSKFSLDNKIGEGGFGTVYKGKLTNGPLVAVKRAKKDVQNKHLYEFKNEIYTLSRVEHLNLVRLYGYLEHGQEKIIVVEYVNNGTLREHLDGTRGQGLEIGERLDIAIDVAHAVTYLHMYTDHPIIHRDIKASNILITDNLRAKVADFGFARLATIDPDKTHISTQVKGTAGYVDPDYMRTHHLTEKSDVYSFGVLLVEMITGRHPIEPQRQLNERVTIRWVSISELIKALQKDLQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0737 366 Gene3D Transferase(Phosphotransferase) domain 1 211 365 - -
Lal3g0737 366 MobiDBLite consensus disorder prediction 64 116 - -
Lal3g0737 366 MobiDBLite consensus disorder prediction 1 35 - -
Lal3g0737 366 MobiDBLite consensus disorder prediction 66 82 - -
Lal3g0737 366 PANTHER OS02G0821400 PROTEIN 3 356 - -
Lal3g0737 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lal3g0737 366 Gene3D Phosphorylase Kinase; domain 1 91 210 - -
Lal3g0737 366 MobiDBLite consensus disorder prediction 83 116 - -
Lal3g0737 366 SUPERFAMILY Protein kinase-like (PK-like) 109 351 IPR011009 -
Lal3g0737 366 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Lal3g0737 366 Pfam Protein tyrosine and serine/threonine kinase 135 340 IPR001245 GO:0004672|GO:0006468
Lal3g0737 366 ProSiteProfiles Protein kinase domain profile. 134 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0737 366 PANTHER OS01G0253100 PROTEIN 3 356 IPR045271 GO:0004714|GO:0006468
Lal3g0737 366 SMART serkin_6 134 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0737 Lal-Chr3 6324898 6328584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0737 106 338 Receptor kinase-like Gene Family AT1G79620 50.633 2.85e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lal3g0737 PK_Tyr_Ser-Thr 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0737 - - gmx:100815871 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0737 3 6324898 6328584 Lal3g0737 3 6324898 6328584 ECH