Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0693 ATGTGGATAACATGCAAGTGTTTTGGTCATGAGACTAGTGGAAAAGAGGGAATTCAGATAAGGAGAATTCTTGGTCTGGTAAGTGATTTCTTTTATGCTCTTCAGACATTGAAGCACCGTGGCCCTGACTGGAGTGGGCTCCACCAACATGGTGATTGCTATTTGGCTCATCAACGCTTAGCCATAGTTGATCCTGCTTCTGGTGATCAACCTCTCTTCAATGAAGACAAATCAATTATTGTTACTGTAAATGGAGAGATTTACAATCATGAAGAACTGAGGCAACAACTGCCTCATCACAAGTTCCGAACAGGAAGTGATTGTGATGTTATTGCTCACTTGTACGAGGAGCATGGAGAAAACTTTGTGGACAAGCTGGATGGTATCTTTTCTTTTGTTCTGCTGGATACCCGCGACAACAGTTTCTTGGTGGCAAGGGATGCTATAGGGGTTACTTCCTTGTATATTGGTTGGGGATTAGATGGTTCTGTTTGGATTTCATCAGAACTCAAAGGGTTGATCGATGACTGCGAAAATTTCAAGTCTTTTCCACCAGGCCACTTGTACTCTAGCAAAGAAAGAGAGTTCCGTAGATGGTACAATCCTCCTTGGTTCTCTGAGGCTATTCCCTCAGCCCCTTATGATCCTCTAGCTTTGAGGATTGCCTTTGAGAAGGCAGTCATAAAAAGGTTGATGACTGATGTGCCTTTTGGCGTTTTACTGTCCGGAGGCTTGGACTCGTCATTGGTTGCATCCATCACTGCTCGCTACCTAAAAGACACGAAAGCAGCCAAGCAGTGGGGAGCAAAATTGCACTCATTCTGCGTAGGCCTTGAGGGTTCCCCAGACTTGAAGGCTGGAAAAGAAGTTGCAGACTATCTAGGAACTGTCCATCATGAATTCCACTTTACTGTCCAGGATGGCATAGATGCCATTGAAGAGGTCATCTACCATATTGAAACATATGATGTGACCACAATCAGGGCCGCAACGCCTATGTTTCTTATGTCTCGTAAGATTAAATCACTAGGAGTCAAATGGGTTATCTCTGGAGAAGGATCTGATGAGATCTTTGGAGGGTATCTGTACTTCCATAAGGCTCCGAATAAAGAGGAATTCCACCAAGAAACATGCCGAAAGATTAAAGCTCTACACAAATATGATTGCTTGCGAGCCAACAAATCGACATTTGCTTGGGGTCTGGAAGCTCGAGTGCCATTTTTGGACAAGGAGTTCATCGGTGTCGCAATGAACATTGATCCTGAACATAAAATGATAAAACGTGACGAAGGTCGAATTGAGAAATGGGTGCTTAGGAAGGCCTTTGATGATGAAGAGAATCCTTATCTTCCAAAGCACATTTTGTATAGGCAGAAAGAACAATTCAGTGATGGAGTTGGTTATAGTTGGATTGATGGCCTTAAAGATCATGCTGAAAAACATGTGACTGATAAAATGATGCTTAATGCTCCTAACATCTTCCCCCATAACACTCCTAATACAAAAGAAGCATACTACTATAGAATGATCTTTGAGAGGTTCTTTCCTCAGAACTCGGCTCGGCTGACTGTTCCCGGAGGACCTAGTGTCGCGTGCAGCACGGCGAAAGCTATTGAGTGGGATGCTGACTGGTCTAACAACCTTGATCCTTCTGGTAGAGCAGCACTTGGGGTGCATGTTTCAGCTTATGAGAATCTGGTCAACTCAGTAAGCAATGGCAAAGGTGTAATACCAGAAAATATTATACCTAAGATGGAGATTTCTCCTCTAGGAGTTGCCATCAAAAGCTAG 1791 0.435 MWITCKCFGHETSGKEGIQIRRILGLVSDFFYALQTLKHRGPDWSGLHQHGDCYLAHQRLAIVDPASGDQPLFNEDKSIIVTVNGEIYNHEELRQQLPHHKFRTGSDCDVIAHLYEEHGENFVDKLDGIFSFVLLDTRDNSFLVARDAIGVTSLYIGWGLDGSVWISSELKGLIDDCENFKSFPPGHLYSSKEREFRRWYNPPWFSEAIPSAPYDPLALRIAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITARYLKDTKAAKQWGAKLHSFCVGLEGSPDLKAGKEVADYLGTVHHEFHFTVQDGIDAIEEVIYHIETYDVTTIRAATPMFLMSRKIKSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHKYDCLRANKSTFAWGLEARVPFLDKEFIGVAMNIDPEHKMIKRDEGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAEKHVTDKMMLNAPNIFPHNTPNTKEAYYYRMIFERFFPQNSARLTVPGGPSVACSTAKAIEWDADWSNNLDPSGRAALGVHVSAYENLVNSVSNGKGVIPENIIPKMEISPLGVAIKS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0693 596 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 30 203 IPR029055 -
Lal3g0693 596 CDD Asn_Synthase_B_C 220 465 IPR001962 GO:0004066|GO:0006529
Lal3g0693 596 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 27 201 IPR029055 -
Lal3g0693 596 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 35 596 - -
Lal3g0693 596 CDD AsnB 33 201 IPR033738 -
Lal3g0693 596 Pfam Asparagine synthase 219 370 IPR001962 GO:0004066|GO:0006529
Lal3g0693 596 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 5 194 IPR017932 -
Lal3g0693 596 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 35 376 IPR006426 GO:0004066|GO:0006529
Lal3g0693 596 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 207 489 - -
Lal3g0693 596 Pfam Glutamine amidotransferase domain 57 173 IPR017932 -
Lal3g0693 596 Gene3D HUPs 204 522 IPR014729 -
Lal3g0693 596 PANTHER ASPARAGINE SYNTHETASE 35 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0693 Lal-Chr3 5570397 5576066 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0693 K01953 - gmx:547877 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0693 3 5570397 5576066 Lal3g0693 3 5570397 5576066 ECH
Lal3g0693 3 5570397 5576066 Lal17g1627 17 17629712 17636378 LSH
Lal3g0693 3 5570397 5576066 Lal22g0352 22 2265189 2269707 PCT
Lal3g0693 3 5570397 5576066 Lal6g0377 6 2418827 2425151 PCT
Lal22g0352 22 2265189 2269707 Lal3g0693 3 5570397 5576066 PCT
Lal6g0377 6 2418827 2425151 Lal3g0693 3 5570397 5576066 PCT