Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0675 ATGTCGAAGGTTGTTTGTGTCACCGGAGCCAGCGGCGCCATTGGGTCATGGCTTGTACGCCTCCTCCTCGAGCGTGGCTACACCGTCCACGCCACCATCCAAGATCTCAAGGATGAGAAAGAGACCAAGCATTTGGAGGCAATGGAAGGAGCTAAGAGCTGTCTTCACTTTTTCCAGATGGATCTTCTTGACAGCGACTCCATCGCCGCCGCCATAAAAGGTTGCGCCGGAGTTTTCCACCTTGCATGTCCTAACATCATTGGTCAAGTCAAAGATCCTGAGAAGGAGATTTTGGAACCGGCCATAAAAGGGACAGTTAATGTGCTGAAAGCGGCGAAGGAAGCAGGGGTAGAGCGTGTGGTGGCAACATCATCAATCTCGTCCATAATGCCAAGCCCTAACTGGCCACCTCATAAGATTAAGAGTGAGGATTGTTGGACCGATCTTGATTATTGTACGGACAAAGGGTTATATTATCCCATTGCAAAGACTCTTGCGGAGAAAGCAGGTTGGGATTTTGCAAAGGAGACAGGTTTCGATGTAGTGATGATAAATCCAGGCACAGCCTTGGGCCCTCTCATTCCACCAAGAATAAATTCCAGCATGGCTGTGCTTGTTAAGGTTCTCAAAGGTAATCACTACATTCACCTAGGGCGTAATATTAGATGGATTTTGAAGCATAATGAAGAGAAATGGAATGTTTCAAAGTCGGTATCAGAAGTGTATTTCATAGCTCTGAAGCATTTCATTTCCTTATCTCCTTCTCCAGAATCCAACTCGCAAATAGATCCTAAGCGAAAAAACTTGTATCTCAACAACTCCTTTGTTGTGGACCATGTTACAGGGGACAAAGAGACATACGAAGATTTCTTTATGGGAACAGCCCACTTTAAAGACATAGCCTTGGCACATATTTTGGCCTATGAGAAAAAGAATGCTTCTGGAAGGCACTTGTGTGTTGAAGCAATTCGTCACTATGGTGATTTTGTGGCCAAGGTTGCTGAGTTATACCCTGAATATAATGTGGCTACGTTGCCAAAGGATACACAACCTGGGTTGTTGAGAGCAAAGGATGCATCAAAAAAGCTGATTGATTTAGGTCTTGAATTCACTCCAATCGATCAAATTATCAAAGATGCAGTGGAGAGTTTGAAGAGTTTGGGTTATGTTTAA 1173 0.4442 MSKVVCVTGASGAIGSWLVRLLLERGYTVHATIQDLKDEKETKHLEAMEGAKSCLHFFQMDLLDSDSIAAAIKGCAGVFHLACPNIIGQVKDPEKEILEPAIKGTVNVLKAAKEAGVERVVATSSISSIMPSPNWPPHKIKSEDCWTDLDYCTDKGLYYPIAKTLAEKAGWDFAKETGFDVVMINPGTALGPLIPPRINSSMAVLVKVLKGNHYIHLGRNIRWILKHNEEKWNVSKSVSEVYFIALKHFISLSPSPESNSQIDPKRKNLYLNNSFVVDHVTGDKETYEDFFMGTAHFKDIALAHILAYEKKNASGRHLCVEAIRHYGDFVAKVAELYPEYNVATLPKDTQPGLLRAKDASKKLIDLGLEFTPIDQIIKDAVESLKSLGYV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0675 390 Pfam NAD dependent epimerase/dehydratase family 5 197 IPR001509 -
Lal3g0675 390 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 215 - -
Lal3g0675 390 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 283 382 - -
Lal3g0675 390 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 215 - -
Lal3g0675 390 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 283 382 - -
Lal3g0675 390 Gene3D - 1 225 - -
Lal3g0675 390 Gene3D - 251 390 - -
Lal3g0675 390 CDD FR_SDR_e 5 368 - -
Lal3g0675 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 218 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0675 Lal-Chr3 5270081 5273478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0675 3 390 Monolignol Biosynthesis Gene Families AT5G58490 51.546 2.28e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0675 - - gmx:100137082 483.026