Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0669 ATGGCCACCGAGCCCCGCCCCGTTCCACACCCACCGCCACTGACGGCAACGGAAGTTTCAACCACCCGCAACAGCCTCCGTTTCTGGCAGTTAATGGTAGCCGGTTCTGTTGCAGGCTCCGTCGAACACATGGCAATGTTCCCCATCGACACCGTGAAGACCCACATGCAAGCACGCTCATCATCGTGTCCCATCAAAACATCCTTAACCGTTCGCCAAGCCGTTGGATCCATTCTCAAATCCAACGGTCCATCTGCGCTGTATCGTGGCATCGGAGCAATGGGTCTCGGTGCGGGACCCGCACACGCCGTTTATTTCTCCTTCTACGAAACTTGCAAGAAGTTTCTCTCACGCGGGAACCCCAACAACGCTTCCGCACACGCGGTCTCTGGCGTGTGTGCCACAATCGCCAGTGATGCTGTTTTTACACCCATGGATATGGTGAAGCAGAGGCTGCAATTGAGTGGTGGTGGTGGTTACAATGGTGTTTGGGACTGTGTTAAGAGGGTGTTGAGGGAGGAAGGGTTTGGTGCGTTTTATGCGTCATATAGGACTACTGTTTTGATGAATGCTCCGTTTACTGCCGTGCATTTCGTATCTTATGAGGCCGCGAAACGAGCTTTGGTCGAGGTTTCGCCCGGGAGTGTTGATGATGGAAGGTTGATTGTTCATGCTACTGCTGGTGCTGCTGCTGGTGCTTTGGCTGCTTCGGTTACGACGCCACTTGATGTTGTTAAAACTCAATTGCAGTGTCAGGGTGTCTCTGGATGTGATAGGTTTAAAAGTGGTTCAATTGGGGATGTTTTTAAAACAATAGTGAAAAAGGACGGATATAGAGGGCTCATTCGAGGATGGATTCCAAGGATGCTCTTCCATGCCCCCGCGGCTGCAATCTGCTGGTCCACATATGAAGCTGGGAAAACCTTCTTCCACGAATTTAATCAGAGTTAA 951 0.5142 MATEPRPVPHPPPLTATEVSTTRNSLRFWQLMVAGSVAGSVEHMAMFPIDTVKTHMQARSSSCPIKTSLTVRQAVGSILKSNGPSALYRGIGAMGLGAGPAHAVYFSFYETCKKFLSRGNPNNASAHAVSGVCATIASDAVFTPMDMVKQRLQLSGGGGYNGVWDCVKRVLREEGFGAFYASYRTTVLMNAPFTAVHFVSYEAAKRALVEVSPGSVDDGRLIVHATAGAAAGALAASVTTPLDVVKTQLQCQGVSGCDRFKSGSIGDVFKTIVKKDGYRGLIRGWIPRMLFHAPAAAICWSTYEAGKTFFHEFNQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0669 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 309 IPR018108 -
Lal3g0669 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 207 IPR018108 -
Lal3g0669 316 PANTHER MITOFERRIN-1-RELATED 20 315 - -
Lal3g0669 316 Gene3D Mitochondrial carrier domain 188 316 IPR023395 -
Lal3g0669 316 PRINTS Mitochondrial carrier protein signature 31 44 IPR002067 GO:0055085
Lal3g0669 316 PRINTS Mitochondrial carrier protein signature 44 58 IPR002067 GO:0055085
Lal3g0669 316 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Lal3g0669 316 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Lal3g0669 316 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Lal3g0669 316 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Lal3g0669 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 115 IPR018108 -
Lal3g0669 316 SUPERFAMILY Mitochondrial carrier 25 304 IPR023395 -
Lal3g0669 316 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 20 315 - -
Lal3g0669 316 Gene3D Mitochondrial carrier domain 13 187 IPR023395 -
Lal3g0669 316 Pfam Mitochondrial carrier protein 221 312 IPR018108 -
Lal3g0669 316 Pfam Mitochondrial carrier protein 123 209 IPR018108 -
Lal3g0669 316 Pfam Mitochondrial carrier protein 25 118 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0669 Lal-Chr3 5240905 5244168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0669 3 314 Chloroplast and Mitochondria Gene Families AT2G30160 73.502 1.18e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0669 K15113 - gmx:100802640 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0669 3 5240905 5244168 Lal3g0669 3 5240905 5244168 ECH