Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0667 ATGACAAGGGTTTTTCCCACACAACGTTTTCAAAGAGAACTCAATGCGTGGAAGTGGCATTTTCATTTTTCTCGTGTCTTGCTAGAAAAATCAATGAACAATAGTACTTTTGAAACTTCCATTCCCTTTATATGTGAGAAAATACAAGATTTTCATCCTCTTGGCATCATTCATGGTGACAACCTTACACATTACAATTACTCACTACTAATGTTCAACTTCATTCTAGTTATCACGATTACCGCCATTATTCGTCTTCTTCTTAAGCCTCTAAAACAACCTAATGTGGTCTCTCAAATAATCGGTGGCATCGTTGTTGGACCTTCTGTTCTGAAACACAGTACATGGTTTAAACATTATATAATACATGGTGGAGCCGAATACCTATCAAGAAATCTTGGAGTAATGGGATTCATGTTCTATGTTTTCATTTATGGTGTGAAGATGGATCCCTTCCTTTTAAGAAAAACAGGAAAAGTACACTTATATGTAGCATTAGTTGGCATCAGCATTCCCACAACAGCAGTATTTGTTGTGGGTCTATTGATGAGGAAAACAATGGAAAAAGAAATGGCAACAAATTCTTCAATAGGAATAATAGCAGCTTACTTAGGAATTACAGCATTTCCAGTTCTCTATAATGTTCTGAAAGAGTTTAACTTTCTAAACTCAGATGTAGGAAGAATGGCATTAGCTATGGCAATAATTGGAGATGTATTTGGTGTGTTTACAGTTGTAGCATTTGAGGCTGGAAAACAAGGAGAAGCAGGACCTGAAAATGCATTGTGGTATATGATTTCTCTTGTGGTAATTGTAATGATTATTTTGTTTTGCATTAGACCTGTAATGGTATGGATTGATGATAACATTCCAGAAGGGGGTTCAGTTGATCATTCTTTTGTAGTTGCCATTCTTCTAGGGGTTTTAGTGATGGGATTTATAACTGATTTTTTAGGCATATCAATTGCAAATGGACCATTGTGGTTAGGGTTAGTAATTCCAGATGGGCCTCGTTTAGGAGCAACAATAATTCAAAAGAGTGAGACAATTATGAATGACTTACTTATACCATTCTCATATCTTATGGTAGGATCTTATACTGATGTATATGCCATGAGTAATGTTGATTGGTCAAGTTTGGTACCATTATTTACCATGGTTTTAACTGGCTACTTGACTAAATTCTTTTCCACATGGCTTGCTGCATTTTATTGGAGGATTCCATTTAGAGATGGCTTAACCCTTAGCTTCATTATGAGTTTGAGAGGCCAAATTGAGCTTATATTGTTTGTGCATATGATGGACAAAAAGATCTTGAAGATACCGGGCTTCACATTATTGGTACTTGTAACAACAATAGTTAGTGCAATTTTGACTCCTCTAATATCCATGTTATATGATCCTACAAGGCCATACATAGTGAGCCAAAGGAGAAACATTCAACACAACCCTCCAAAGAAAGATCTTACAATGGTGGTATGCATTTTTGACACTCGAAGCATAACTGGTCTCATCAATCTACTTGATATCTCAAATGCAACCTTAGATGGACCCCTTTCAGTTTTTGCACTTCGAGTAATTGAACTTGTTGGTCGTGCTAACCCTTTGATCATAGACCACTCCAAACAAGAAGTGCCTCGCATTTATCGATGGTCACATGCCATAAAAACTCTTGAGAATTTTAGTGATCTTAGAGAGTTTGTGAAGATCCAATTTTTCACTTCTGTGTCCCCAAAGAAATCAATGTTTCAAGATATTTGTTTACTAGCACTTGAACACGAAGCTTCCTTAATCATATTACCTTTCAATAAGGGTGGTGTTCATAACCATGTAGTCAGGCTTATAAATTTACAAGTCCTTGATCATGCACCTTGCTCTATTGCAATTTTTGTTGACAATGGTTTTCTTCAATCCACCAACATAGGAAGTTCCCGTCGCAAATCTACTAGACACAAATTTGCTGTGTTGTTTCTGGGAGGTGCAGATGCTAGAGAGACTCTTGTTTATGCAGATAGAATGGTTTCAAACCCTGAAGTGTCTCTAACAGTGATTAGGTTTTTCACTCACACATGTGTAGCAAACAATGAAGTAGAGAAGAAGCTTGATGATGGAATTATGACATGGTTTTGGGTTAAAAATGAGAGGAATACTAATGTGGTATATAGAGAGTTGGTGGTTAAGAATGGAGAAGAAACAATAGCAGGAATTAGGGCTATCAATGATGGTTCTTATGATCTTTGGTTAGTGGGAAGGAAACAAGGGATAAACCCTATTTTTCTTACTGGTTTATCAGAATGGAGTGAAAATGAAGAGTTAGGACTCATAGGGGACTTTGTTTCCTCTCCAGATTTTCCTGGTTCACATTCTGTTTTAGTGATACAACAACAAATCTTAAGAGCATAA 2403 0.3654 MTRVFPTQRFQRELNAWKWHFHFSRVLLEKSMNNSTFETSIPFICEKIQDFHPLGIIHGDNLTHYNYSLLMFNFILVITITAIIRLLLKPLKQPNVVSQIIGGIVVGPSVLKHSTWFKHYIIHGGAEYLSRNLGVMGFMFYVFIYGVKMDPFLLRKTGKVHLYVALVGISIPTTAVFVVGLLMRKTMEKEMATNSSIGIIAAYLGITAFPVLYNVLKEFNFLNSDVGRMALAMAIIGDVFGVFTVVAFEAGKQGEAGPENALWYMISLVVIVMIILFCIRPVMVWIDDNIPEGGSVDHSFVVAILLGVLVMGFITDFLGISIANGPLWLGLVIPDGPRLGATIIQKSETIMNDLLIPFSYLMVGSYTDVYAMSNVDWSSLVPLFTMVLTGYLTKFFSTWLAAFYWRIPFRDGLTLSFIMSLRGQIELILFVHMMDKKILKIPGFTLLVLVTTIVSAILTPLISMLYDPTRPYIVSQRRNIQHNPPKKDLTMVVCIFDTRSITGLINLLDISNATLDGPLSVFALRVIELVGRANPLIIDHSKQEVPRIYRWSHAIKTLENFSDLREFVKIQFFTSVSPKKSMFQDICLLALEHEASLIILPFNKGGVHNHVVRLINLQVLDHAPCSIAIFVDNGFLQSTNIGSSRRKSTRHKFAVLFLGGADARETLVYADRMVSNPEVSLTVIRFFTHTCVANNEVEKKLDDGIMTWFWVKNERNTNVVYRELVVKNGEETIAGIRAINDGSYDLWLVGRKQGINPIFLTGLSEWSENEELGLIGDFVSSPDFPGSHSVLVIQQQILRA 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0667 800 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 42 799 - -
Lal3g0667 800 Pfam Sodium/hydrogen exchanger family 75 461 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal3g0667 800 Gene3D - 68 470 IPR038770 -
Lal3g0667 800 PANTHER CATION/H + ANTIPORTER 42 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0667 Lal-Chr3 5232536 5238820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0667 31 797 Antiporter Super Family AT5G37060 40.248 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0667 - - gmx:100783296 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0667 3 5232536 5238820 Lal3g0667 3 5232536 5238820 ECH
Lal5g1005 5 12346242 12349899 Lal3g0667 3 5232536 5238820 LSH