Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0662 ATGACAACCTCATTCTCTAATCTCTTTGCTTCTCCCTCCGAAAGGCCATCGAGGTTTTCGAGTGAAGCTGGGTTGAGTGTGCCAAAATTCATGTCCATACCACCTTCTTCTCTCCCTCTATCTCCCCCACTTATTTCTCCTTCTTCTTACTTTGCTGAACTTCTCGACTCTCCTGTTCAACCTGAACTCTTGCAACGTGCAGTTGCTGCTCAAGGCTTCAATTGGAATAATATCAAAGAAAACGAATACTTGTCAAGTTTTTCATTCCCTACTCAGCCAAAGCCTCCCCTTCAATCTTCAAACATTACAAATCTAACTCAACAGGCATGGAGTTTTCAGGAATCAACTAAGCTAAAGAGTCAAGTGAAAACTGAATACTCTTCTTCTATGCATAGTTTCACCGCTGAGAATGCTAATATCCAAAGTAACAAGAACAATAATAGTAATTTCCAACCTCAGATCTTAAGTAGAAGGTCAGATGATGGGTACAATTGGAGAAAATATGGGGAAAAACAAGTGAAAGGGAGTGAAAATCCAAGAAGTTATTACAAATGCACAAACCCTAATTGCCCAACAAAGAAAAAGGTTGAGAGGGATTTAGATGGCCAAATTACTGAGATAGTTTACAAGGGCAATCATAACCATCCTAAGCCACAAGCTATTAAGAGTAACTCATCTTCTCTTGCTATTCCTCCTTCAAATCATGTATCATATGCAACATATGGCAGTGGACAAATGGATTTGGTGGCTACACCTGAGAACTCATCAGTATCAATGGGAGATGATGATTATGAGAATTGCTCTCAGAAGAGTAAACAAGGAGCTGATGAAGATGAACCTGATGCTAAAAGATGGAGAAGATCTTGCCAAAATAATTTAGCTTTGCTTTTAGGGCAAAGGAGAATAGAAGGTGAAAAAGAGAGTATATCAGCACATGGAAGTAGAACAGTGAGAGAGCCCAGAGTTATAGTTCACACAACCAGTGACATTGATATTCTAGATGATGGGTATAGATGGAGGAAATATGGGCAGAAAGTAGTGAAGGGAAATACAAATCCAAGGAGTTACTACAAGTGCACATACCTAGGATGTTCAGTGAGGAAGCATATAGAAAGGGCCCCACAAGATCTAAGTGCAGTGATCACAACCTATGAGGGAAAACACAACCATGATGTTCCTGCAGCACGTTGCAGTGGCAACCATTCAATCAAAAAATCACTGCCCAATGATACAACAAACAACACTACTCAATACACTAACAATTCCATCAACAATTCTATTCAAAATTTTAGACCACAAGAAGGGCAATCACACTTCAACCAAGGGATGCTTCAGAGTCCAGAAAGTTTTGGATTCTTTGGGTTTGAGAATCTAATGGAGTCTTACATGAATCAGCAATCTAACAATGTTTTTTCTTCCACAGCTAAGGAAGAGTCTAGAAATGACTCATTTCTTGATTCTTTGCTATGCTAA 1473 0.3931 MTTSFSNLFASPSERPSRFSSEAGLSVPKFMSIPPSSLPLSPPLISPSSYFAELLDSPVQPELLQRAVAAQGFNWNNIKENEYLSSFSFPTQPKPPLQSSNITNLTQQAWSFQESTKLKSQVKTEYSSSMHSFTAENANIQSNKNNNSNFQPQILSRRSDDGYNWRKYGEKQVKGSENPRSYYKCTNPNCPTKKKVERDLDGQITEIVYKGNHNHPKPQAIKSNSSSLAIPPSNHVSYATYGSGQMDLVATPENSSVSMGDDDYENCSQKSKQGADEDEPDAKRWRRSCQNNLALLLGQRRIEGEKESISAHGSRTVREPRVIVHTTSDIDILDDGYRWRKYGQKVVKGNTNPRSYYKCTYLGCSVRKHIERAPQDLSAVITTYEGKHNHDVPAARCSGNHSIKKSLPNDTTNNTTQYTNNSINNSIQNFRPQEGQSHFNQGMLQSPESFGFFGFENLMESYMNQQSNNVFSSTAKEESRNDSFLDSLLC 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0662 490 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 468 IPR044810 GO:0003700
Lal3g0662 490 SUPERFAMILY WRKY DNA-binding domain 325 393 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 MobiDBLite consensus disorder prediction 1 20 - -
Lal3g0662 490 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 18 468 - -
Lal3g0662 490 MobiDBLite consensus disorder prediction 251 284 - -
Lal3g0662 490 MobiDBLite consensus disorder prediction 392 420 - -
Lal3g0662 490 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 Pfam WRKY DNA -binding domain 334 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 MobiDBLite consensus disorder prediction 1 21 - -
Lal3g0662 490 Gene3D WRKY domain 144 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 Gene3D WRKY domain 318 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 ProSiteProfiles WRKY domain profile. 328 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 SMART WRKY_cls 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 SMART WRKY_cls 333 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 MobiDBLite consensus disorder prediction 402 420 - -
Lal3g0662 490 ProSiteProfiles WRKY domain profile. 160 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal3g0662 490 MobiDBLite consensus disorder prediction 265 284 - -
Lal3g0662 490 SUPERFAMILY WRKY DNA-binding domain 158 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0662 Lal-Chr3 5175762 5179822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0662 157 399 WRKY Transcription Factor Family AT2G38470 55.431 1.76e-91 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal3g0662 WRKY 4.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0662 K13424 - gmx:100127393 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0662 3 5175762 5179822 Lal3g0662 3 5175762 5179822 ECH
Lal5g1010 5 12460707 12465562 Lal3g0662 3 5175762 5179822 LSH
Lal3g0662 3 5175762 5179822 Lal18g1264 18 15269399 15272972 PCT
Lal3g0662 3 5175762 5179822 Lal22g0332 22 2113617 2117179 PCT
Lal3g0662 3 5175762 5179822 Lal6g0362 6 2302659 2305975 PCT
Lal18g1264 18 15269399 15272972 Lal3g0662 3 5175762 5179822 PCT
Lal22g0332 22 2113617 2117179 Lal3g0662 3 5175762 5179822 PCT
Lal6g0362 6 2302659 2305975 Lal3g0662 3 5175762 5179822 PCT