Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0659 ATGGTTTCCAAGGTTAACAAGAGAACACACATGTACAAAAACCTCCAACTTCTTCGTTCAATTACACACTCTCATTCGCACCGAAAAACCTCAGTGTTGTTGGATGCTTCGAAGTATATACAAGGCCTAAAGCAAAATCTGCAACAAATGAACCAAATAGCATCTGCAACAATATCTCAAAAAACAATTGCCTATGATTCAATGCCTACGCTTAAAGTTGAACCACAAGAAGAGGGTTTTATGATAAAGGTGCTGAGTGAAAGGAGTTGTGAGGGGTTACTTGTGTTCATATTAGAAGCCTTTGAAGAATTAGGTCTTGATGTGCTCCAAGCTAGGGTTTCTTGTGAGGGCAACTTCTGTTTAGAAGCACTTGGAATTAAAGGATGTGATGCATCAGTTCTATTAGATGATACTTCAACCTTTACAGGAGAGAAATCAGCAGCTGCAAATGTGAATTCTCTGAGAGGTTTTGATGTAATTGATGACATCAAAACTAAGTTGGAAACTGCTTGTCCTGGAATTGTTTCTTGTGCCGATATTCTTGCTGTTGTTGCTCGTGATTCAGTTGTGGCATTGGGTGGTCAATCTTGGAGTGTTGGGTTAGGCAGAAGAGATTCAACCACTGCAAGTAAAGATGCTGCCACTAATGATATTCCATCCCCTCTAATGGATCTCACTGACCTTATATCTGATTTTTCAAGTAAGGGGTTTACCACCCAAGAGATGGTAGCCCTAACAGGAGCACACACAATAGGGCAAGCTAGATGCCAGTTGTTCAGGGGAAGAATTTACAATGAAACAAACATTGATTCAGATTTTGCAACATCAGTGAAGTCAAATTGTCCAAGCAGTGGTGGTGACAGCAACCTAACTTCACTTGATGTAACAACAAATGTGTTATTTGACAATGCTTATTTCAAGAATCTTGTAAATAAGAAAGGGCTTCTACATTCTGATCAACAACTCTTTAGTGGTGGATCTACAGACTCACAAGTAACTACCTACAGCACCAGCACTTCAACTTTCTATGCTGATTTTGGTGCTGCCATGCTCAAAATGGGAAACCTTAGCATTTTAACTGGGCAAAGTGGTCAAATTCGTATTAACTGCCGCAATGTTAACTAA 1125 0.3973 MVSKVNKRTHMYKNLQLLRSITHSHSHRKTSVLLDASKYIQGLKQNLQQMNQIASATISQKTIAYDSMPTLKVEPQEEGFMIKVLSERSCEGLLVFILEAFEELGLDVLQARVSCEGNFCLEALGIKGCDASVLLDDTSTFTGEKSAAANVNSLRGFDVIDDIKTKLETACPGIVSCADILAVVARDSVVALGGQSWSVGLGRRDSTTASKDAATNDIPSPLMDLTDLISDFSSKGFTTQEMVALTGAHTIGQARCQLFRGRIYNETNIDSDFATSVKSNCPSSGGDSNLTSLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSTSTFYADFGAAMLKMGNLSILTGQSGQIRINCRNVN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0659 374 SUPERFAMILY Heme-dependent peroxidases 126 374 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 ProSiteProfiles Plant heme peroxidase family profile. 126 374 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 Gene3D - 126 371 - -
Lal3g0659 374 ProSitePatterns Peroxidases proximal heme-ligand signature. 241 251 IPR019793 -
Lal3g0659 374 Pfam Peroxidase 125 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PANTHER PEROXIDASE 72-RELATED 126 374 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 115 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 155 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 174 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 193 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 240 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 292 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 308 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Plant peroxidase signature 348 361 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 CDD secretory_peroxidase 128 371 IPR033905 GO:0004601|GO:0042744
Lal3g0659 374 Gene3D Peroxidase, domain 2 219 353 - -
Lal3g0659 374 PRINTS Haem peroxidase superfamily signature 175 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Haem peroxidase superfamily signature 193 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal3g0659 374 PANTHER PEROXIDASE 126 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0659 Lal-Chr3 5146772 5153474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0659 126 374 Peroxidase AT5G05340 62.151 3.76e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0659 K00430 - gmx:100818176 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0659 3 5146772 5153474 Lal3g0659 3 5146772 5153474 ECH
Lal3g0659 3 5146772 5153474 Lal22g0200 22 1249704 1251233 ECH
Lal3g0659 3 5146772 5153474 Lal4g1597 4 20152849 20155499 ECH
Lal14g0779 14 9661669 9663371 Lal3g0659 3 5146772 5153474 ECH
Lal9g1711 9 19355086 19356160 Lal3g0659 3 5146772 5153474 ECH
Lal3g0659 3 5146772 5153474 Lal21g1274 21 15982908 15986415 LSH
Lal5g1019 5 12581940 12583783 Lal3g0659 3 5146772 5153474 LSH
Lal3g0659 3 5146772 5153474 Lal22g0200 22 1249704 1251233 PCT
Lal22g0200 22 1249704 1251233 Lal3g0659 3 5146772 5153474 PCT