Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0650 ATGGATGGTAACAAGGATGAAGCACTAAAGTGTCTTCGCATCGCAGAGGAAGCAATCGCAATCGGTAACAAAGATCGTGCTCTCAAATTCATCAACATCGCACAACGTCTCAATCACAATTTGCCACTTGATTCCTTACTCAGCCAGTGTCAGCGCCTCGATTCTCAATCTGCCACAAGCCGCGCCAGTGCTAGCAGCGGCGCGAAGAATAAGGCGATGGTGAACGAGGGTTTGAACGGTAAGAGAAATTATACTGAAGAAAATGTTCAATTGGTTAGGGAAATTAAGGGGAATTCGGATTATTATGCAATTCTAGGTGTTGAGAAAAGTTGTTCTGTTGAAGAGATTAGAAAAGCTTATAGGAAAATCTCATTGAAAGTTCATCCTGATAAGAATAAAGCCCCGGGTTCTGAAGACGCGTTTAAGAAAGTCTCTAAGGCTTTTAAGTGTTTGAGTGATGATAGTTCTAGAAGGCAGTATGATCAAACAGGACTAGTTGATGAGTTTGAGTATAATCAACAGAATTACACCAATGTTAGGCGCCGGAGGCGCAGAGCTACCACTGCTCATGATTTTTTCGAGGATGAGTTTGACCCGGACGAGATATTTAGGACATTCTTTGGACAATCTAATGCGTTCGACAGAGCTCGCGTTTATAGGACACGGGCAGCAACATGTAATCATAATAATAGGCAAGAATCTCAGGGTGGATCAGGACTTAATATAATGCTGCTTATTCAGCTCTTGCCATTCTTGCTCATTTTGTTGCTTGTTTACTTGCCCTTTTCGGAACCAAACTATTCCTTGCACAAGAATTATGCATACCAGATACCAAAGACGACTGAGGAGTATGGGGTCCAGTTTTTCGTTAAATCTCAAGGTTTTGATGCTAACTATCCACCTGGAAGTCCTGCTCGCGCAAGAATTGATGACAGTGTCATAAAGGATTATAGGAATATGCTTCATCGTTTTTGTAAAATAGAGATGCAAAGGCGTACTTGGAATAGGAACCTGCCTGCTCCTCATTGTGAAAAGCTAAAGAACTTTGGAGTTGCCTCTGACTGA 1065 0.4207 MDGNKDEALKCLRIAEEAIAIGNKDRALKFINIAQRLNHNLPLDSLLSQCQRLDSQSATSRASASSGAKNKAMVNEGLNGKRNYTEENVQLVREIKGNSDYYAILGVEKSCSVEEIRKAYRKISLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQNYTNVRRRRRRATTAHDFFEDEFDPDEIFRTFFGQSNAFDRARVYRTRAATCNHNNRQESQGGSGLNIMLLIQLLPFLLILLLVYLPFSEPNYSLHKNYAYQIPKTTEEYGVQFFVKSQGFDANYPPGSPARARIDDSVIKDYRNMLHRFCKIEMQRRTWNRNLPAPHCEKLKNFGVASD 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0650 354 Pfam DnaJ domain 100 161 IPR001623 -
Lal3g0650 354 SUPERFAMILY Chaperone J-domain 97 179 IPR036869 -
Lal3g0650 354 Gene3D DnaJ domain 97 219 IPR036869 -
Lal3g0650 354 PANTHER CHAPERONE PROTEIN DNAJ 49 1 351 - -
Lal3g0650 354 SMART dnaj_3 99 156 IPR001623 -
Lal3g0650 354 Pfam Domain of unknown function (DUF1977) 263 333 IPR015399 -
Lal3g0650 354 PANTHER AT29763P-RELATED 1 351 - -
Lal3g0650 354 CDD DnaJ 100 153 IPR001623 -
Lal3g0650 354 PRINTS DnaJ domain signature 102 120 IPR001623 -
Lal3g0650 354 PRINTS DnaJ domain signature 120 135 IPR001623 -
Lal3g0650 354 PRINTS DnaJ domain signature 136 156 IPR001623 -
Lal3g0650 354 ProSiteProfiles dnaJ domain profile. 100 164 IPR001623 -
Lal3g0650 354 MobiDBLite consensus disorder prediction 58 78 - -
Lal3g0650 354 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0650 Lal-Chr3 5094409 5097342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0650 95 161 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 6.44e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0650 K09518 - gmx:100820432 451.825