Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0633 ATGGCATCTTCTACCGTTGATATTGCTTCATCTTCACCCTTTGGTTGTGTTCTTAGGGACCGCAACCATCGGGATAGGTGTCGGGAAAGCAGTGTTTTTCAAAAAAGAATGAAGAATTTTGTCATGGACCACCTTAACATTCCTACTGACTCGACAACGAATGAGAACAACAACAATGCTTTCAAAGCTTCCAAGAACAATAATCTTGACAGCCTTTGTTTCACGGGAAGCAATCACAACAATAACAAGGAGAAGGATGAATATTGTCTGGCTTCGTTGGTTAGCCCAAGACACTTGCAGCTTCTCGATCGATGGGCTGCGAAACATGCCCGAGAAATGGTGTCAACATTGGAAAATGAAGCAGAGTTGTTGGCAATGCCAAATTCAAACAACAACAATGACATGCTAAAAAGGACATATAGTAATTCTAGCAATGATGATGTTTCTTCTGGAACCTCAGCTCTTGGTGCTTCATCTCTTGTTCAGATGTGGGAGATGAGGCTAAACAAATCCAATGGATCTAAACCAACCACACCAAACTTTACCAATTCATTATTGAAAGAACAAAACAGAGGAGGTTCAGAAGCAGAGGAATCCTCTTCTTCTTCTTCCACTTCTTCTTCTGATCATGAACCACCAGGGAATGAAGAACCATTTCCTGATTGGGAATTTGATAAGATAGGAATGAGCAATCAATGTTCGCCGAAATCAAGGTTCTCTTCATTGGAGTCAGCCGAAAGCGACAGGGTCAGTGTTGCAGACATAATCAAAAGGCTCACCTCTACAAAGCAAGGTCAGAGTCCATCCCATTCAACTGGTGAGGAAAATGACAATGAGGGGTGGAGTAGCAGTGTGACATGTTCTCCTTGTAGAGAACGTGACTGTGGTTCCGGGCTAGATCCTTCAGAGAACAAAGCATTTCTTCCACAGATTACTTGTTTGCCAAGGATTAGAGGGCGCCAAGCATTCCATGATTTGCTTATGCAGTTGGAGCGTGACCGGCATGTGGAGCTCAAGAATCTAGCAGAGCGTGTAGCAGTTTCCAAGTTCACACAAAGAGGTCGTATTCAGTCAGTGCTCCGGCTTAGATTGTTGCAACGTGAGGTAGCGGCTAATAATGAATCTCCCCAGAAATCAACAGCATCTGAAGTGAACAGACAACCACAAGGATCTGCAATTATGCAACTAAGGGAAAGATTTAGCACTGGGGCTGATAATAAAACTACAGGGAAGATAGAAGTAGCTGAGCCAAGAAGTCCTCCTATACAATTTGATGCCTCTCCCACCACTGGTCACCTCAGCAAAAACACTTGCAGCCTGACTGTTCAAAGCAAAGCCATTCACTCTCCAGAATCCATGCAAAAATTGGTTGCTGAAAGTAGTGTAGATCAAAATAAGGAAGAAGCTCGACAAAGTTCAAACACCATGCACCAGGAAACATGCCTTGCAGCTCAAGATAATGACTCACAGGAAATTGCTGAGGCAACTCCATCCACGAATGAGTCAAATGTAAAAGAGATGGAAGATAAGGTAGAGACAAGCAACCAAATGGCTGAAACAAGTTACGACGAGACAGAAGAAGAGGAGGAGGAAGACACAAGTAACCAGCACTTTGCTGAAAGCTGTTATGATGAGATAGCAGAAGAGGTTGAGGGTATTGGTCAGAATCATGATGAAACTAGTTATGATTGGATCAGCGAAATTTCTCGGCCTAGGAGCTACTGGGAAGAACGCAGGCAAGAATGGTATAGAGAAATGCTTGACACTGAGTCTCACAATGAAGATATTCGTAAGCTCCTTGAAAGAAGAACAGTGTCATCTTTCCTTTCTAGTGACTTCCGCGATAGAATGGATAGATTGATGGAGTGCCATAGGGGAACACAAACACATTTAGTCGGTATACAAGATGAAGAGGAAGACAATCAAGCGTTGATCACAATTTTACAAGAACACTTGCATCTGGCAAGAAGTCCTCGGGAAGATGAAAGAGAGCAACCGGAGGAGAAAGAAGAGGAAGAAGTGAGGAGAAATGACGAAGACGAAGAAGAGCAAAAGGAAGAAGAAGAGGAGGAAGATGAGCATGAGGGGGAGACCTTGATGAGTAATTCATATAATGAAGCTGGTGATTATTTTAGTCAATCTTCATCACCAACTAATATGACAACATGGAGTTACATAGACAACGAAACCGGTGATGATTTTGATAGAGTTGCGTCTATATCCTCACCACCTTCTCAATCTCAGTCTTTTTGTCAGGATACTCAGCAAAACTCTTCATCCGTGAATCATCATTCAATTGAAATGGAACTCATCTATGATTTGAGAGGTCAAATGGAGCAACTTCATTGCGAGATGTCCGAGCTAAGGAAATCAATGAAGACCTGCATGGATATGCAGATGCAAGCACAACAATCCAATAATCAAGAAGTTCACACAGTTAAAAAGGAAGAAAAGAAGTCACATGACAAGGCACCAATTAAAGGCAACTGCTGCATTTGCTATGACATGAAAGTGGACTCAGTTTTGTACAGGTGTGGACACATGTGTGCATGTCTGAAGTGTGCAAATGAGTTACAATGGAACAGTGGAAAATGTCCAATATGTAGAGCTAAAATAGTAGATGTTGTTCGAGTCTATGTTGATTTTTAA 2649 0.4224 MASSTVDIASSSPFGCVLRDRNHRDRCRESSVFQKRMKNFVMDHLNIPTDSTTNENNNNAFKASKNNNLDSLCFTGSNHNNNKEKDEYCLASLVSPRHLQLLDRWAAKHAREMVSTLENEAELLAMPNSNNNNDMLKRTYSNSSNDDVSSGTSALGASSLVQMWEMRLNKSNGSKPTTPNFTNSLLKEQNRGGSEAEESSSSSSTSSSDHEPPGNEEPFPDWEFDKIGMSNQCSPKSRFSSLESAESDRVSVADIIKRLTSTKQGQSPSHSTGEENDNEGWSSSVTCSPCRERDCGSGLDPSENKAFLPQITCLPRIRGRQAFHDLLMQLERDRHVELKNLAERVAVSKFTQRGRIQSVLRLRLLQREVAANNESPQKSTASEVNRQPQGSAIMQLRERFSTGADNKTTGKIEVAEPRSPPIQFDASPTTGHLSKNTCSLTVQSKAIHSPESMQKLVAESSVDQNKEEARQSSNTMHQETCLAAQDNDSQEIAEATPSTNESNVKEMEDKVETSNQMAETSYDETEEEEEEDTSNQHFAESCYDEIAEEVEGIGQNHDETSYDWISEISRPRSYWEERRQEWYREMLDTESHNEDIRKLLERRTVSSFLSSDFRDRMDRLMECHRGTQTHLVGIQDEEEDNQALITILQEHLHLARSPREDEREQPEEKEEEEVRRNDEDEEEQKEEEEEEDEHEGETLMSNSYNEAGDYFSQSSSPTNMTTWSYIDNETGDDFDRVASISSPPSQSQSFCQDTQQNSSSVNHHSIEMELIYDLRGQMEQLHCEMSELRKSMKTCMDMQMQAQQSNNQEVHTVKKEEKKSHDKAPIKGNCCICYDMKVDSVLYRCGHMCACLKCANELQWNSGKCPICRAKIVDVVRVYVDF 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0633 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 800 881 IPR013083 -
Lal3g0633 882 MobiDBLite consensus disorder prediction 740 761 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 170 212 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 259 286 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 652 727 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 653 672 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 170 227 - -
Lal3g0633 882 ProSiteProfiles Zinc finger RING-type profile. 830 869 IPR001841 -
Lal3g0633 882 PANTHER BNAC05G24000D PROTEIN 1 881 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 485 536 - -
Lal3g0633 882 Pfam Zinc finger, C3HC4 type (RING finger) 828 874 - -
Lal3g0633 882 Coils Coil 667 697 - -
Lal3g0633 882 SUPERFAMILY RING/U-box 809 874 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 371 391 - -
Lal3g0633 882 CDD mRING-HC-C3HC5_NEU1 829 869 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 700 727 - -
Lal3g0633 882 PANTHER BNAC05G24000D PROTEIN 1 881 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 128 153 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 485 502 - -
Lal3g0633 882 MobiDBLite consensus disorder prediction 673 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0633 Lal-Chr3 4881881 4890266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0633 830 878 C3H Transcription Factor Family AT3G06140 40.816 1.92e-06 49.3