Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0631 ATGGAACCAAGCATGAGGGTTTCAATGTTTTCACTTGTGTTAGTGTTTTTCTTTTGCTTTTCACTTATGTTAAGTGTTCATAGCTATGAAAACATGTTAGACAAAGAGAGAATTTTGAGAGTGCTTTTGAATGTGAAATCATCGTTTGTTTCAGACCCAGAAAATGTTTTGAGTGATTGGTCAGAAAAAAACAAAGATTATTGTAGTTGGAGAGGTGTGACATGCAAAGATTTTTTGCATGACTCGGTGCATGCAGTTGTTGGACTCAACCTGTCTAACTCGTCACTCACTGGGTCAATATCACCCTCACTCGGTCGTTTGCAAAATTTGCTTAGCCTTGATCTCTCTTTGAACAATCTCAACGGTCCCATTCCAACTACACTTTCCAACCTCACTTCATTGGAATCACTCATTCTCAACTCTAACCAACTTACCGGTCACATTCCCACTGAGTTAGGCTCGTTACTGAGTCTCCGAGTCATGAAACTCGGTGACAATGCACTCACTGGTGTCATTCCCACCTCCCTCGGGAATCTCGTTAACCTTGTCACCCTTGGATTGGCCAAATGTCAACTCACTGGGTTGATTCCACCTAAACTCGGTCAACTCAGTGAGTTAGAGATATTGAATCTTCAAGACAATCACTTGGTGGGACCGATTCCAGCCGAGTTAGGTAACTGCTCAAGCATCATATCCCTCTCAGCTGCTCACAACACACTCAATGGTTCAATCCCGAGTGAACTGAGTCAACTCAGTAATCTCCAAATCCTTAACCTTGCAAACAACAGCATTTCAGGTGAGATTCCGAGTCAACTCAGTAAACTGAGTGAACTCATTTATCTAAATTTAATGGGAAATAAGCTTGTGGGTCATATACCAAAGTTTTTTTCTCAAATGGGTAAGCTTCAATTCCTTGATTTGTCCATGAATATGTTTAGTGGAGGTTTACCAGAGGAGTTTGGCAATATGAGTTGGTTACGAAGTTTGATTCTTTCTTATAATCCACTCTATGGGAAAATTCCAAGAAAAATATGTTCCAATGCAATAAGTTTGCAACAATTGATGATTGCAGGGAATGGACTTCATGGTGAAATTCCATCTGAATTGGGTCAATGCAAATCACTGAAACAACTTGTTTTGTCTGACAATTCTCTCAATGGATCAATACCTATTGAGATTTATGGTTTGCATGAATTAACTGATCTATTGCTTTATAACAACACCTTGGTTGGTTCAATATCTCCTTTCATAAAGAACCTCACTAACTTGCAAACACTTGCATTGTATTTTAACAATTTGAGTGGTGCTATTCCTAGAGAGGTTGGGATGCTTAGGAATTTGGAAAAATTGAATCTTTATAGAAATCAGTTATCAGGGTCAATACCTTTAGAGATTGGTAATTGTTCTAGATTGCAAATGCTTGATCTTTATGGAAATCATTTAAGTGGTGGAATTCCCATCACTATTGGGAGGTTGAAAGAGTTGAACTTTCTTCATCTTAAGAATAATGAGCTTGTTGGTCAGATTCCACCAACTCTTGGTAATTGTCATAAACTGAATGTTCTTGATTTAGAAGGTAATAAGCTTTCAGGTGGCATTCCTGCAACATTTGGATTTCTCAGATCCTTGGAGCAGTTCATACTCTTGAACAATTCTCTTGAAGGTAACCTTCCTCGCCAACTCGCGAATTTAGTGAACCTTGTCTTTGTGAATATTGGAAAGAACAGACTAAATGGTAGCTTGGCTCCTCTGTCTAGTTCTTTGTCTATCCAATCTTTTGATGTCACAGATAATGCATTTAGCAGTGAAATTCCCTATCAATTTGGTAACTTGCCCTCCCTTCAGAGGCTAAGATTAGGTAACAACAAATTTTCGGGTGAGATTCCGAGGACATTAGGGAATATCACTGAATTATCATTGTTGGATCTCTCTGGCAATTCACTCACCGGACCGATACCTGTTGAGCTTTCTTTGTGTAGTAAACTTTCCACCATTGATTTAAACAATAATCTTCTATCCGGAACCATTCCTTCATGGCTAGGAAGTTTGCCTCAGTTGGAAGAGCTTAAACTCTCATTTAATCAATTTTATGGGCCTATTCCACCAACCATATTCAAATGTTCCAAGTTGCTAGTCCTGTCCCTGAATGACAATTCTCTTAATGGAAGTATCGGCAGTGAAATCGGAGATCTTGCATCCCTTAATGTCCTCACACTTGACCATAATAATTTCTCTGGAAAAATCCCTCCTTCCATTGGTAAATTGAGCAAGCTTTATGCCTTGCAGCTATCTAAGAATAGGTTTGATGGTCAGATCCCAAATGAGATTGGAAATCTTCAAAATCTCCAAAGCCTTTTAGACCTCAGTTACAATAATCTCTCCGGTTATATCCCATCTTCACTCAGGTTGCTGTCAAAATTGGAAGCACTTAATCTTTCCCACAATCAACTCACTGGAGAAGTCCCTCCTATACTAGTTGCTGAAATGAGTAGCTTGGAAAAGCTTAATATCTCTTATAATAACTTTCAAGGCAAATTGGATAAGAAGTTTTCTCGCTGGCCATATGAGGCTTTCGCAGGGAACAAACATCTTTGTGGAGCCTCTCTTGGGCGCTGCAACCACAGTGATACTCGTAAGCTATCTGCTTTACGGGAGACATCAGTAGCCATAATATCTGTTATTTCAACATTAGCTGTAATTGCACTGATAGTACTTGTGGTGAGGCTTTCCTTGAAAAAGAAGCAAGTCTTTTTCAGGAAAAGCAGTGGAGTAAATTGTGTTTACTCATCCTCGTCCTCGCAAGCAAAGAAAAGATCGTTCCTACTCAACGCTGGTGGAAGGAAAGACTTAAGGTGGGAGGATATCATGGGTGCTACAAACAATCTAAGTGACGACTTCATAATTGGTTCAGGAGGTTCGGGTACTGTCTATAGAGCTGAATTGCACACCGGTGAGACTGTGGCCGTCAAGAAGATTTCGAGGAAAGATGATTATCTGTTGAACAAAAGTTTTATCAGAGAAATCAAAACTTTGGGGAAAATTAGGCATAGACATTTGGTAAAACTAATAGGTTGTTGTAGAAACAGAAACAAAGGAACAGGCTGTAATCTCTTGATTTATGAGTATATGGAGAATGGAAGTGTATGGGATTGGTTACATGGAAAACCTATAGCAAAGGGAAGCCTTGATTGGGACACAAGGTTCAAAATTGCTGTGGGATTAGCTCATGGAGTTGAGTACCTTCATCATGATTGCGTGCTGAAAATCATTCACCGGGACATCAAATCCAGCAACTTATTGCTAGATTCCAAAATGGATGCACACTTGGGAGATTTTGGGTTGGCAAAAGCACTCGTCGAGAATTCTGACTCTAATACCGAGACTAATTCTTGTTTTGCTGGATCTTATGGTTACATAGCCCCGGAATTTGCATACACAATGAAGGCAACAGAAAAAAGTGATGTTTACAGCATGGGAATTGTGTTTATGGAACTAGTTTGTGGGAAAATGCCAACTGATGCTGCTTTCATAGGAGATATGGACATGGTGAGATGGGTAGAGATGCACATTGATATGCATGGCGCTGCCCGCGACGAATTGATAGATTCCGAGCTGAAACCTCTTTTACCTGCTGAAGAGTTTGCTGCATTTCAAGTCCTTGAGATAGCTATGCAATGCACCAAAACCATACCACAGGAGAGGCCATCGTCGCGACAAGTATGTGATCTTCTTCAGCATGTACTCGAAAACAAAAGGGTTGACTTTGAGAAGATGAAATTGGATCATAACAAGTAA 3795 0.3984 MEPSMRVSMFSLVLVFFFCFSLMLSVHSYENMLDKERILRVLLNVKSSFVSDPENVLSDWSEKNKDYCSWRGVTCKDFLHDSVHAVVGLNLSNSSLTGSISPSLGRLQNLLSLDLSLNNLNGPIPTTLSNLTSLESLILNSNQLTGHIPTELGSLLSLRVMKLGDNALTGVIPTSLGNLVNLVTLGLAKCQLTGLIPPKLGQLSELEILNLQDNHLVGPIPAELGNCSSIISLSAAHNTLNGSIPSELSQLSNLQILNLANNSISGEIPSQLSKLSELIYLNLMGNKLVGHIPKFFSQMGKLQFLDLSMNMFSGGLPEEFGNMSWLRSLILSYNPLYGKIPRKICSNAISLQQLMIAGNGLHGEIPSELGQCKSLKQLVLSDNSLNGSIPIEIYGLHELTDLLLYNNTLVGSISPFIKNLTNLQTLALYFNNLSGAIPREVGMLRNLEKLNLYRNQLSGSIPLEIGNCSRLQMLDLYGNHLSGGIPITIGRLKELNFLHLKNNELVGQIPPTLGNCHKLNVLDLEGNKLSGGIPATFGFLRSLEQFILLNNSLEGNLPRQLANLVNLVFVNIGKNRLNGSLAPLSSSLSIQSFDVTDNAFSSEIPYQFGNLPSLQRLRLGNNKFSGEIPRTLGNITELSLLDLSGNSLTGPIPVELSLCSKLSTIDLNNNLLSGTIPSWLGSLPQLEELKLSFNQFYGPIPPTIFKCSKLLVLSLNDNSLNGSIGSEIGDLASLNVLTLDHNNFSGKIPPSIGKLSKLYALQLSKNRFDGQIPNEIGNLQNLQSLLDLSYNNLSGYIPSSLRLLSKLEALNLSHNQLTGEVPPILVAEMSSLEKLNISYNNFQGKLDKKFSRWPYEAFAGNKHLCGASLGRCNHSDTRKLSALRETSVAIISVISTLAVIALIVLVVRLSLKKKQVFFRKSSGVNCVYSSSSSQAKKRSFLLNAGGRKDLRWEDIMGATNNLSDDFIIGSGGSGTVYRAELHTGETVAVKKISRKDDYLLNKSFIREIKTLGKIRHRHLVKLIGCCRNRNKGTGCNLLIYEYMENGSVWDWLHGKPIAKGSLDWDTRFKIAVGLAHGVEYLHHDCVLKIIHRDIKSSNLLLDSKMDAHLGDFGLAKALVENSDSNTETNSCFAGSYGYIAPEFAYTMKATEKSDVYSMGIVFMELVCGKMPTDAAFIGDMDMVRWVEMHIDMHGAARDELIDSELKPLLPAEEFAAFQVLEIAMQCTKTIPQERPSSRQVCDLLQHVLENKRVDFEKMKLDHNK 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0631 1264 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 7 1261 - -
Lal3g0631 1264 ProSiteProfiles Protein kinase domain profile. 962 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0631 1264 ProSitePatterns Protein kinases ATP-binding region signature. 968 991 IPR017441 GO:0005524
Lal3g0631 1264 SUPERFAMILY L domain-like 40 336 - -
Lal3g0631 1264 Gene3D Phosphorylase Kinase; domain 1 923 1042 - -
Lal3g0631 1264 Pfam Protein kinase domain 967 1241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0631 1264 ProSiteProfiles Leucine-rich repeat profile. 253 276 IPR001611 GO:0005515
Lal3g0631 1264 Gene3D Transferase(Phosphotransferase) domain 1 1043 1260 - -
Lal3g0631 1264 SMART serkin_6 962 1248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0631 1264 Gene3D Ribonuclease Inhibitor 295 345 IPR032675 -
Lal3g0631 1264 SUPERFAMILY Protein kinase-like (PK-like) 948 1244 IPR011009 -
Lal3g0631 1264 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1089 1101 IPR008271 GO:0004672|GO:0006468
Lal3g0631 1264 Gene3D Ribonuclease Inhibitor 346 580 IPR032675 -
Lal3g0631 1264 Gene3D Ribonuclease Inhibitor 581 880 IPR032675 -
Lal3g0631 1264 Pfam Leucine rich repeat 591 648 IPR001611 GO:0005515
Lal3g0631 1264 Pfam Leucine rich repeat 757 817 IPR001611 GO:0005515
Lal3g0631 1264 Pfam Leucine rich repeat 278 336 IPR001611 GO:0005515
Lal3g0631 1264 SMART LRR_typ_2 420 443 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 492 516 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 251 275 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 299 322 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 829 860 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 203 227 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 444 468 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 683 707 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 731 755 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 323 347 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 804 828 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 779 803 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 611 635 IPR003591 -
Lal3g0631 1264 SMART LRR_typ_2 131 155 IPR003591 -
Lal3g0631 1264 Gene3D Ribonuclease Inhibitor 192 294 IPR032675 -
Lal3g0631 1264 Pfam Leucine Rich Repeat 518 540 IPR001611 GO:0005515
Lal3g0631 1264 Pfam Leucine Rich Repeat 253 275 IPR001611 GO:0005515
Lal3g0631 1264 Pfam Leucine rich repeat N-terminal domain 40 75 IPR013210 -
Lal3g0631 1264 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 7 1261 - -
Lal3g0631 1264 PRINTS Leucine-rich repeat signature 638 651 - -
Lal3g0631 1264 PRINTS Leucine-rich repeat signature 804 817 - -
Lal3g0631 1264 SUPERFAMILY L domain-like 318 629 - -
Lal3g0631 1264 SUPERFAMILY RNI-like 593 876 - -
Lal3g0631 1264 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0631 Lal-Chr3 4875173 4879287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0631 41 701 Receptor kinase-like Gene Family AT1G17750 37.481 6.05e-104 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal3g0631 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0631 - - gmx:100801889 1662.89