Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0619 ATGGTTGGTCATAGTATCAGAAACCTCCAACTCACTCCACTCTCCGCCGCCGTCACCGCCGTTGACTCCGACGACCTTGAGGATGTGCGCCTATTGGACTCGTACGGCACCGACGATGTCTCCGATTCCAAAATTGACGAAGGAATGAAACGGATTCACGTTAGGGTAACTGGCATGACTTGTGCCGCTTGCTCCAATTCCGTTGAATCAGCTCTTCAATCTGTCAACGGCGTTCTCACCGCTTCCGTTGCTCTTCTCCAGAACAAAGCCAACGTCGTTTTCAATCCCACTCTTCTCAAGGATGAAGACATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGAAATATTACACGAACCCAACACACTTGTAAAGGTGCCACATGGAACCCTGGTGGGACAGTTCACAATTGGTGGTATGACATGTGCAGCCTGTGTAAATTCTGTTGAAAATATTCTGATAAATCTTCCAGGAGTCAAAAGGGCTGTAGTAGCTTTGTCTACTTCGTTAGGCAAAGTTGAATATGATTCTAATATAATTAGTAAAGATGATATAGTCAATGCAATTGAAGATGCTGGTTTTGAAGGTTCATTTTTACAGAGCAGTGAACAGGATAAAATTACTTTAGGTGTTGTTGGTGTGTGCAGTCTGATTGACAGACAAGTTTTAGAAGGCATACTTAGCAGCATGAAAGGAGTAAGGCAGTTTCGCTTTGACCATATATCAAGTGAATTAGATGTTATGGTTGATCCTGAAGTTCTCAGTTCTAGATCCTTAGTTGATGGGATCCATGGGGGAAGCAATGGAAGGTTTAAATTACATGTCAGAAACCCTTATACAAGGATGGCTTCTAAAGATGTTGGAGAGACGTCAACTGTGTTTCGGCTCTTTATCTCCAGCCTGTTTCTTAGTATTCCTCTATTCTTCATGCGGGTAGTTTGTCCTCATATACCAATGCTGTATTCCTTGTTACTTCGGAGATGTGGGCCTTTCCTCGTTGGTGATTGGTTGAAGTGGGCATTGGTGAGTTTCATCCAATTCGGGATTGGGAAGCGCTTCTACATAGCAGCTGGCAGAGCTCTTAGAAATGGTTCAACAAATATGGATGTCCTGGTTGCTGTTGGAACTACTGCCTCTTACACATATTCTGTTTGTGCTCTTCTATATGGTGCTTTTACTGGATTTTGGTCTCCAACATACTTCGAAACAAGTGCCATGCTCATAACATTTGTTTTGTTGGGCAAGTATTTAGAATGCCTTGCTAAGGGAAAGACATCAGATGCCATCAAGAAGTTGGTAGAACTTGCTCCTGCGACAGCAATATTGATTGTCAAAGATAAAGGTGGTAGATCTATTGAAGAAAGGGAAATTGATTCTTTGCTCATTCAACCTGGTGACACATTAAAAGTTATTCCGGGTACAAAGATCCCTGCTGATGGTGTCGTTACTTGGGGTTCAAGTTATGTAAATGAGAGCATGGTGACTGGCGAATCTGTACCTGTCTTAAAGGAGGTGAATGCATCCGTTATTGGAGGTACAATAAACTTGCATGGCGCCCTTCACATCCAAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAATTTGGTTGAGACAGCGCAAATGTCCAAAGCTCCCATTCAGAAGTATATTGCTGGGTCTATTGGAGCTTACCCAGAAGAGTGGCTTCCAGAAAATGGGAATCACTTTGTTTTTGCCCTCATGTTTTCAATATCTGTAGTGGTGATTGCATGTCCCTGTGCGCTTGGCTTGGCAACACCAACGGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACCATGGAGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGTTGAAGTATGTAATATTTGATAAAACAGGAACTCTAACTCAGGGAAAAGCCACAGTTACTACTGCCAAGGTATTCACGGGAATGGAACGTGGAGAGTTTCTTACATTGGTGGCTTCTGCAGAGGCTAGTAGTGAACACCCACTGGCAAAAACAATATTGGAATATGCACGTCATTTTCATTTCTTTGATGACTCCTCTGTTACTACTGATACTCAAAATGATGGCAAGGAGTTGAAGTTTGGGTGGCTTTTTGATGTGTCAGACTTCTCTGCTCTTCCAGGAAGAGGTGTACAATGCTTTATAGATGGAAAGCGTATTTTGGTTGGTAACAGGAAGTTAATTGTGGAAAATGGCATAGAGATTTCAACCGAAGCTGAAAATACAGTGGTAGATCTGGAAGAAAGTGCAGAGACAGGGATACTGGTAGCGTATGATGATATATTAATTGGAGTCTTAGGGGTTGCAGACCCACTAAAAAGAGAAGCTTCTGTTGTTATCGAGGGACTCCAGAAAATCGGTGTCATGCCTGTTATGGTTACAGGAGATAATTGGAGAACAGCTCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGAGCAGAGGTTGTGCCAGCAGGAAAGGCAGATGTTGTTCGATCATTTCAAAAGGATGGAAGCATAGTTGCAATGGTAGGTGACGGTATCAATGACTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCAATTGGGGCTGGGACAGATATTGCAATAGAAGCTGCTGATTATGTTTTGATGAGAAATAACTTGGAAGATGTGATCACAGCCATTGACCTTTCCCGGAAGACCTTTTCTCGTATTCGGCTGAATTACGTATTTGCAATGGCCTACAACACTGTTGCTGTACCAGTTGCCGCTGGGGTTTTTTATCCTTCACTGGGGATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTAGTATGTTCTTCTTTGCTTCTCAGAAGGTATAGAAAGCCCAGACTTGCTACAATACTTGAAATAGTTGACAAAATGAAAGAGGGTGAGGAGTTATCAGTTATATATTCTCACCTTTTACCACCTACAACTTCAACCAAACCCATTGGTAGTGATACCATGACTACTACTACTACTACCAACCAGTACTGTATGCAATTCTATCAGCAACAACCTCTCATGGATGGTGCAATGGTACCACCCAAAGAAGGATTTTCTGGTGCAACTACTAGTCATCAATTGACTCCTCCAAAGGTTAATAATAATAATGTGTCTAAACCAATCCGAAGAAGATCTAGAGCTTCTAAAAGAACCCCAACCACACTCCTCAATGCAAATACCACCAACTTTAGGGCACTAGTGCAACAATTCACAGGGTGTCCTAGCACAACCATGTCTTCACTTGGTGTTCATAAGGGACCTATTACCTTAAATTTCAAACATGGTAGTAGCAGACAGCATATTGGTACTAGAAGTAATCACAACCAAGCTCATCAAACAGCCTTGGCCGCAGCCGCGGCCACGCAGTTTCCGGTTCAGGAACTACTGCCTCAGCAACAGTTGTTCCAAGAACAGCAAGGTGGTTACTGGTTTGATTATATGAAGGGTAATAATTTTCTTCCAACTTTGGGTAATTCTAGGTCTAGCATGGAGGTTCTTGATGGAATGGTTGTGGGTAATGATTATAATTTGCATGATCTAACTAGTGTTAATGCTTTCTCCAATGATACTTATTAA 3633 0.4266 MVGHSIRNLQLTPLSAAVTAVDSDDLEDVRLLDSYGTDDVSDSKIDEGMKRIHVRVTGMTCAACSNSVESALQSVNGVLTASVALLQNKANVVFNPTLLKDEDIKNAIEDAGFEAEILHEPNTLVKVPHGTLVGQFTIGGMTCAACVNSVENILINLPGVKRAVVALSTSLGKVEYDSNIISKDDIVNAIEDAGFEGSFLQSSEQDKITLGVVGVCSLIDRQVLEGILSSMKGVRQFRFDHISSELDVMVDPEVLSSRSLVDGIHGGSNGRFKLHVRNPYTRMASKDVGETSTVFRLFISSLFLSIPLFFMRVVCPHIPMLYSLLLRRCGPFLVGDWLKWALVSFIQFGIGKRFYIAAGRALRNGSTNMDVLVAVGTTASYTYSVCALLYGAFTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATAILIVKDKGGRSIEEREIDSLLIQPGDTLKVIPGTKIPADGVVTWGSSYVNESMVTGESVPVLKEVNASVIGGTINLHGALHIQATKVGSDTVLSQIINLVETAQMSKAPIQKYIAGSIGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANHGVLIKGGDALERAQMLKYVIFDKTGTLTQGKATVTTAKVFTGMERGEFLTLVASAEASSEHPLAKTILEYARHFHFFDDSSVTTDTQNDGKELKFGWLFDVSDFSALPGRGVQCFIDGKRILVGNRKLIVENGIEISTEAENTVVDLEESAETGILVAYDDILIGVLGVADPLKREASVVIEGLQKIGVMPVMVTGDNWRTARAVAKEVGIQDVRAEVVPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAADYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNTVAVPVAAGVFYPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLATILEIVDKMKEGEELSVIYSHLLPPTTSTKPIGSDTMTTTTTTNQYCMQFYQQQPLMDGAMVPPKEGFSGATTSHQLTPPKVNNNNVSKPIRRRSRASKRTPTTLLNANTTNFRALVQQFTGCPSTTMSSLGVHKGPITLNFKHGSSRQHIGTRSNHNQAHQTALAAAAATQFPVQELLPQQQLFQEQQGGYWFDYMKGNNFLPTLGNSRSSMEVLDGMVVGNDYNLHDLTSVNAFSNDTY 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0619 1210 MobiDBLite consensus disorder prediction 1040 1060 - -
Lal3g0619 1210 CDD HMA 135 196 IPR006121 GO:0046872
Lal3g0619 1210 PRINTS P-type cation-transporting ATPase superfamily signature 491 505 - -
Lal3g0619 1210 PRINTS P-type cation-transporting ATPase superfamily signature 631 645 - -
Lal3g0619 1210 PRINTS P-type cation-transporting ATPase superfamily signature 776 787 - -
Lal3g0619 1210 PRINTS P-type cation-transporting ATPase superfamily signature 798 808 - -
Lal3g0619 1210 PRINTS P-type cation-transporting ATPase superfamily signature 851 870 - -
Lal3g0619 1210 PRINTS P-type cation-transporting ATPase superfamily signature 874 886 - -
Lal3g0619 1210 TIGRFAM TIGR00003: copper ion binding protein 135 196 IPR006122 GO:0005507
Lal3g0619 1210 TIGRFAM TIGR00003: copper ion binding protein 52 115 IPR006122 GO:0005507
Lal3g0619 1210 ProSitePatterns E1-E2 ATPases phosphorylation site. 633 639 IPR018303 -
Lal3g0619 1210 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 369 960 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lal3g0619 1210 SUPERFAMILY HAD-like 630 957 IPR036412 -
Lal3g0619 1210 SFLD p-type atpase 613 903 IPR044492 -
Lal3g0619 1210 Gene3D - 598 908 IPR023214 -
Lal3g0619 1210 Gene3D - 49 120 - -
Lal3g0619 1210 Pfam haloacid dehalogenase-like hydrolase 628 865 - -
Lal3g0619 1210 Pfam Heavy-metal-associated domain 54 114 IPR006121 GO:0046872
Lal3g0619 1210 Pfam Heavy-metal-associated domain 136 196 IPR006121 GO:0046872
Lal3g0619 1210 PANTHER HEAVY METAL P-TYPE ATPASE 554 971 - -
Lal3g0619 1210 PANTHER HEAVY METAL P-TYPE ATPASE 17 554 - -
Lal3g0619 1210 Pfam VQ motif 1069 1095 IPR008889 -
Lal3g0619 1210 ProSitePatterns Heavy-metal-associated domain. 56 86 IPR017969 GO:0046872
Lal3g0619 1210 SUPERFAMILY Calcium ATPase, transmembrane domain M 394 925 IPR023298 -
Lal3g0619 1210 CDD HMA 54 116 IPR006121 GO:0046872
Lal3g0619 1210 Gene3D - 423 545 - -
Lal3g0619 1210 SFLD C1.7: P-type atpase like 613 903 - -
Lal3g0619 1210 PRINTS H+-transporting ATPase (proton pump) signature 823 839 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal3g0619 1210 PRINTS H+-transporting ATPase (proton pump) signature 851 867 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal3g0619 1210 PRINTS H+-transporting ATPase (proton pump) signature 882 907 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal3g0619 1210 PANTHER ATP7, ISOFORM B 554 971 - -
Lal3g0619 1210 PANTHER ATP7, ISOFORM B 17 554 - -
Lal3g0619 1210 ProSiteProfiles Heavy-metal-associated domain profile. 133 199 IPR006121 GO:0046872
Lal3g0619 1210 ProSitePatterns Heavy-metal-associated domain. 138 168 IPR017969 GO:0046872
Lal3g0619 1210 SUPERFAMILY Calcium ATPase, transduction domain A 455 541 IPR008250 -
Lal3g0619 1210 Pfam E1-E2 ATPase 440 555 - -
Lal3g0619 1210 Gene3D - 638 730 IPR023299 GO:0000166
Lal3g0619 1210 Gene3D - 731 782 IPR023299 GO:0000166
Lal3g0619 1210 SUPERFAMILY HMA, heavy metal-associated domain 46 122 IPR036163 GO:0046872
Lal3g0619 1210 SUPERFAMILY HMA, heavy metal-associated domain 129 202 IPR036163 GO:0046872
Lal3g0619 1210 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 408 652 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal3g0619 1210 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 723 933 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal3g0619 1210 MobiDBLite consensus disorder prediction 1040 1068 - -
Lal3g0619 1210 CDD P-type_ATPase_Cu-like 296 947 - -
Lal3g0619 1210 Gene3D - 134 199 - -
Lal3g0619 1210 ProSiteProfiles Heavy-metal-associated domain profile. 51 117 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0619 Lal-Chr3 4768931 4779718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0619 5 974 Primary Pumps ATPases AT5G44790 72.782 0.0 1446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0619 K17686 - gmx:100804960 1588.93