Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0617 ATGGTGAAATTTCTGAAGCCAAATAAGGCCGTTATCCTTCTCCAAGGCCGTTACGCCGGCAAGAAGGCGGTGATCGTCCGCACCTTCGACGACGGCACCCGCGACCGCCCCTACGGCTACTGTCTCGTCGCCGGAATCAAGAAATACCCGTCCAAGGTGATCAAGAAGGACTCCGCGAAGAAGACGGCGAAGAAGTCGCGCGTGAAGGCGTTCGTTAAGCTCGTGAACTACCAGCACCTCATGCCCACGCGCTACACGCTCGACGTGGATCTCAAGGACGCTGTTAACCCTGATGTGCTTAGTGCTAAGGACAAGAAGGTAACTTCACTCAAGGAGACTAAGAAGCGGTTAGAGGAGAGGTTCAAGACTGGGAAGAACAGATGTTTTAAGGTAGTTCATTTTGATGATTATCAATGGAAGAAAGAATGA 429 0.5152 MVKFLKPNKAVILLQGRYAGKKAVIVRTFDDGTRDRPYGYCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVNPDVLSAKDKKVTSLKETKKRLEERFKTGKNRCFKVVHFDDYQWKKE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0617 142 PANTHER 60S RIBOSOMAL PROTEIN L27 1 129 - -
Lal3g0617 142 PANTHER 60S RIBOSOMAL PROTEIN L27 1 129 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lal3g0617 142 Pfam Ribosomal L27e protein family 52 129 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lal3g0617 142 CDD KOW_RPL27 6 88 IPR041991 -
Lal3g0617 142 Coils Coil 100 127 - -
Lal3g0617 142 Gene3D - 1 139 IPR038655 -
Lal3g0617 142 SUPERFAMILY Translation proteins SH3-like domain 2 111 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0617 Lal-Chr3 4757592 4758850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0617 1 129 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 81.395 2.53e-73 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0617 K02901 - gmx:100799485 234.187