Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0604 ATGAAGTATATTCGGAACAAAAGCTTCAAGAGACTCTTCTCCTTTGGAAAAAGAAGCTTTTTTGGTGAAGAAGAAAATGGTAAGAGATTGGTGAACCTTCAACATGAAGAACACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGAAGAGTTGTTTCATGCCACAAATGGCTTCACCTTAGAAAATATGGTTGGAAAAGGAGGGTATGCAGAGGTTTACAAGGGAAAACTGAATGGTGGTGAAGAAATTGCAGTGAAGAGGTTAACAAGAACTTCAAAGGGTGAGAGAAATGAGAAGGAGTTTCTCAATGAGATTGGTACAATTGGTCACGTGTGCCATTGCAATGTGTTACCACTTCTGGGGTGTTGCATTGACTATGATCTTTACCTTGTTTTTGAACTATCCACAGTTGGTTCTGTTGCTTCCCTTATTCATGATGAGAAATTGCCTCCTATGGATTGGAAAACAAGGCATAAGATAGTTCTTGGAACTGCACATGGCCTCAACTATTTACACAAAGGTTGCCAAAGGAGAATAATTCATAGAGACATCAAGGCATCAAATATTCTACTAACAACAGATTTTGAACCACAGATATCTGATTTTGGACTAGCAAAGTGGCTTCCATCACAATGGACTCATCATTCAATTGTCCCTATAGAAGGAACATTTGGGCATTTGGCACCTGAGTACTATATGCATGGAGTTGTGGATGAGAAAACAGATGTTTTTGCCTTTGGTGTGTTCTTGTTAGAAGTTATCTCTGGGAGAGAACCAGTAGATGGGTCTTACCAAAGCTTGCATAGTTGGGCTAAACCAATATTGAACAATGGGGAGATAGAAAAGCTGGTAGATCCAAGGCTTGAAGGAGCTTATGATGTAACACAGTTTAAAAGACTTGCTTTTGCAGCCTCTTTGTGCATTCGTGCATCTTCAACTTGGAGACCTACCATGAGTGAGGTATTAGAGGTAATGGAGGAAGGAGAGATGGATAAAGAGAAATGGAAAATGGCAGAAGAAGAAGAGCAAGAGCAGAAATACTGGGAATTTGAGGATCTTGAATATGACTATGACAGTTCCCTTTCAATATCTTTTCCTAACTCAGCTAGAAGTACTTAG 1122 0.3975 MKYIRNKSFKRLFSFGKRSFFGEEENGKRLVNLQHEEHPPRPSWKCFSYEELFHATNGFTLENMVGKGGYAEVYKGKLNGGEEIAVKRLTRTSKGERNEKEFLNEIGTIGHVCHCNVLPLLGCCIDYDLYLVFELSTVGSVASLIHDEKLPPMDWKTRHKIVLGTAHGLNYLHKGCQRRIIHRDIKASNILLTTDFEPQISDFGLAKWLPSQWTHHSIVPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEVISGREPVDGSYQSLHSWAKPILNNGEIEKLVDPRLEGAYDVTQFKRLAFAASLCIRASSTWRPTMSEVLEVMEEGEMDKEKWKMAEEEEQEQKYWEFEDLEYDYDSSLSISFPNSARST 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0604 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lal3g0604 373 Gene3D Transferase(Phosphotransferase) domain 1 137 355 - -
Lal3g0604 373 SUPERFAMILY Protein kinase-like (PK-like) 39 326 IPR011009 -
Lal3g0604 373 PANTHER OS08G0249100 PROTEIN 30 354 - -
Lal3g0604 373 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Lal3g0604 373 ProSiteProfiles Protein kinase domain profile. 59 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0604 373 PANTHER OS04G0654600 PROTEIN 30 354 - -
Lal3g0604 373 Pfam Protein tyrosine and serine/threonine kinase 60 324 IPR001245 GO:0004672|GO:0006468
Lal3g0604 373 SMART serkin_6 59 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0604 373 Gene3D Phosphorylase Kinase; domain 1 22 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0604 Lal-Chr3 4620279 4630364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0604 47 331 Trihelix Transcription Factor Family AT1G70460 43.243 1.29e-68 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal3g0604 PK_Tyr_Ser-Thr 9.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0604 - - gmx:100801765 594.734