Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0590 ATGATTTCTTTCTTACCACTTCTCTTCATTATCACTACATTCATCATCTCTCTCATCCTCCTCCGGAAATCACGCTACCGCCATCTCCGCCTTCCTCCGGGGAGTCTGGGGCTGCCCTTCATCGGAGAGACCCTCCAACTCATATCCGCATACAAGACCGAAAACCCTGAACCGTTCATAGACAAACGAGTGAACCGGTTCGGTCCAATCTTCACCACTCATGTATTCGGCGAACCCACCGTGTTCTCGGCCGACCCGGACACGAACCGGTTCATACTTATGAATGAAGGAAAGCTCTTTGATTCCAGCTACCCCGGTTCAATATCGAACCTGTTAGGGAAACACTCTTTGCTTATAATGAAGGGAGCTTTACATAAAAGAATGCATTCACTCACTATGAGTTTCGCTAACTCAACCATCATCAAGGACCATCTACTTGTTGATATAGACCGGCTCATCCGGCTCAGCTTGGATTCTTGGTCCGACCGGGTTTTACTTATGGAGGAGGCTAAGAAGATAACATTTGAGTTGAGTGTTAAGCAATTGATGAGTTTTGATCCAAATGAATGGACCGAAAGTCTAAGGAAAGAGTATGTTCTTGTAATTGAAGGATTCTTCACCCTTCCTTTACCTCTCTTATCCACTACTTACCGCAGAGCAATGAAGGCAAGAACAAAGGTGGCAGAGGCACTAACGTTAGTAGTGAGGGAGAGGAGAAAAGAAAGTGAAAGAATAGAGAAAAAAGACATGTTAGGGGCATTGTTGGCCTCAGGAGAAAAGTTGTCGGACGAGGAAATAGTAGATTTTATGTTGGCTTTGCTTGTAGCTGGGTATGAAACAACCTCTACTATAATGACTCTAGCCATCAAGTTCCTCACTGAGACTCCTCTAGCCTTGGCACACCTCAAGGAAGAGCATGATCAAATCAGAGCAAGGAGTGACCCAAATGCAGCACTTGAATGGACAGATTACAAGTCAATGGCATTTACTCAATGCGTAGTGAATGAGACATTAAGGGTGGCAAACATAATCGGTGGGATATTCAGGAGAGCCACCACTGACATAAACATAAAAGGTTACACTATTCCTAAGGGGTATAAGGTTTTTGCATCATTTCGTGCTGTACATATGAATTCTGACAATTTCAAAGATGCCCATAATTTCAATCCATGGAGATGGCAGAGTAACTCAGAAATAATGAACCCTGGGAATTTATACACACCATTTGGAGGAGGACCACGACTGTGCCCTGGCTATGAGCTTGCCAGAGTGGTGCTTTCTGTATTCCTTCACCGCTTTGTTACCACCTTCAGTTGGGTTCCTGCTGAGAAAGACAAATTGGTGTATTTTCCAACCACTAGGACACAAAAGAAGTATCCAATCATAGTCAAGCGTAGAGAAGGGTCCAAAGCAAGTACAACACAATGTGAGCAAAACAAACATTCCAGAAAGAGCAAAGAATAA 1464 0.4385 MISFLPLLFIITTFIISLILLRKSRYRHLRLPPGSLGLPFIGETLQLISAYKTENPEPFIDKRVNRFGPIFTTHVFGEPTVFSADPDTNRFILMNEGKLFDSSYPGSISNLLGKHSLLIMKGALHKRMHSLTMSFANSTIIKDHLLVDIDRLIRLSLDSWSDRVLLMEEAKKITFELSVKQLMSFDPNEWTESLRKEYVLVIEGFFTLPLPLLSTTYRRAMKARTKVAEALTLVVRERRKESERIEKKDMLGALLASGEKLSDEEIVDFMLALLVAGYETTSTIMTLAIKFLTETPLALAHLKEEHDQIRARSDPNAALEWTDYKSMAFTQCVVNETLRVANIIGGIFRRATTDINIKGYTIPKGYKVFASFRAVHMNSDNFKDAHNFNPWRWQSNSEIMNPGNLYTPFGGGPRLCPGYELARVVLSVFLHRFVTTFSWVPAEKDKLVYFPTTRTQKKYPIIVKRREGSKASTTQCEQNKHSRKSKE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0590 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Lal3g0590 487 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PANTHER CYTOCHROME P450 26 8 465 - -
Lal3g0590 487 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 MobiDBLite consensus disorder prediction 467 487 - -
Lal3g0590 487 PANTHER CYTOCHROME P450 90A1 8 465 - -
Lal3g0590 487 SUPERFAMILY Cytochrome P450 25 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 Pfam Cytochrome P450 208 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal3g0590 487 Gene3D Cytochrome P450 21 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0590 Lal-Chr3 4470999 4478899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0590 120 467 Cytochrome P450 AT5G05690 77.143 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0590 K09588 - gmx:100781291 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0590 3 4470999 4478899 Lal5g1124 5 13969233 13976177 LSH