Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0589 ATGGCCACCACCGCCACCTCTGCCGCTGCGACATCATACTTCTTCGGTACCCGTCTCACTAACACATCCTCAAATTCGGGAAAATTCCACGCCCTATTCAAGTTCAACCTTGGCACCAAAAAGGCGCCACCTGCACCGAAGAAAAAGGAGGTGAAGGTAAAACCCGGTTCGGAGCGGCTCGTGTGGTTGCCAGGTGCCCAGCCACCAGAATGGCTCGATGGGTCACTGGTCGGGGACCGAGGGTTCGACCCGCTCGGATTTGCGAAACCCGCGGAGTATTTGCAGTACGATCTTGACTCTTTGGACCAGAACCTGGCGAAGAACCTGGCTGGTGAAATCATCGGAACTAGGGTGGAGACAACGGAGGTAAAACCGACGCCGTTTCAGCCTTATACGGAGGTTTTTGGGTTGCAAAGGTTCCGTGAGTGTGAGGTCATTCATGGAAGGTGGGCCATGCTTGGTGCTCTTGGTGCCCTTTCCGTTGAAGCCTTCACCGGTGTTGCATGGCAAGACGCTGGAAAGGTAGAGCTAGTTGAAGGGTCATCCTACTTTGGACTTCCACTTCCATTCTCAATCACAACATTGATATGGATTGAGGTACTAGTTATAGGGTACATTGAATTCCAAAGAAATGCAGAACTTGACCCAGAGAAAAGGTTATACCCAGGTGGAAAGTTCTTTGATCCATTGGGATTGGCCAATGACCCTGAAGAGAAAGATAGGCTTCAATTGGCTGAGATCAAACATTCTCGTTTAGCTATGCTGGTCTTTCTCATCTTTGCAATTCAAGCAGCTGTTACTGGAAAAGGCCCTATTAGTTTTATTGCTACCTTCAATAAGTGA 843 0.4947 MATTATSAAATSYFFGTRLTNTSSNSGKFHALFKFNLGTKKAPPAPKKKEVKVKPGSERLVWLPGAQPPEWLDGSLVGDRGFDPLGFAKPAEYLQYDLDSLDQNLAKNLAGEIIGTRVETTEVKPTPFQPYTEVFGLQRFRECEVIHGRWAMLGALGALSVEAFTGVAWQDAGKVELVEGSSYFGLPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLANDPEEKDRLQLAEIKHSRLAMLVFLIFAIQAAVTGKGPISFIATFNK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0589 280 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 280 IPR001344 GO:0009765|GO:0016020
Lal3g0589 280 SUPERFAMILY Chlorophyll a-b binding protein 57 277 - -
Lal3g0589 280 Pfam Chlorophyll A-B binding protein 68 264 IPR022796 -
Lal3g0589 280 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 280 - -
Lal3g0589 280 Gene3D Chlorophyll a/b binding protein domain 60 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0589 Lal-Chr3 4456013 4458938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0589 15 277 Chloroplast and Mitochondria Gene Families AT3G08940 71.591 3.64e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0589 K08915 - gmx:100794604 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0589 3 4456013 4458938 Lal5g1126 5 14014440 14017473 LSH