Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0552 ATGAATATGGTTGAGTTGTGTTGTGGTGTGGTTGGAGAAAGTGAATCTCAATCTCCAATTGAACCAACCTCACGGCGTCGCAGCCTTGACGTCCTCCCTTTCAAATACATAGCTGACGTGGCACCGTCGCAGCCTGGTTCTTCTCGTAAACGCCCAAAGCTTGATCTCTCCGATTGCCAAAACGCAGTTGAAAACCGCAAATCTGTTAACGATGACAACAATCAAACGAAGAAAGAAGGAGATTCAAACGTAAACGACCACGTCGTTTCGGGAACGGAAGAGATTGAACAGTTACCTCCTCCAAAGTTTGGAATAACATCTGTTTGTGGTAGAAGAAGAGATATGGAAGATTCCGTTTCTGTTCATCCTTTCTTCTCTCAACAACACTTCCATTACTTCGGTGTCTTTGATGGACACGGTTGCTCACATGTTGCGACTATGTGTAAGGAGAGGCTTCACCAGATTTTGAACGAAGAGATTGGCGAAGCACGAGAGAAGAATGCGGAATTGGAATGGAAACAGATGATGGAAAAATGTTTTGCTTGCATGGACGATGAGGTTCAGAAGCGAAGCCACAACAATAACCAAAGCTTGAGGTGCAGGTGTGAGCTTCAGACTCCGCACTGCGATGCTGTCGGATCCACCGCCGTTGTCGTCGTCGTGACGCCGGATAAAATCATCGTCTCCAACTGCGGTGATTCACGCGCTGTTCTTTGCCGTAAAGGCGTCGCCATCGCTCTCTCCTCCGATCACAAGCCGGACCGGCCTGACGAGATGAACCGGGTTCAATCAGCTGGAGGGCGCGTGATTAATTGGGATGTCCCTAGAGTTCTTGGAGTGTTATCCATGTCTAGAGCCATAGGTGACAATTATCTGAAGCCTTATGTGATATGTGAACCGGAGGTGACGGTGACGAAACGGAGTAACGACGATGAGTGTTTGATACTGGCGAGTGATGGTTTGTGGGATGTGGTATCAAATGAGACAGCATGCGGGGTGGTGAGGATGTGCCTCAAGGCGGAGAGGCCGGCATTGCCACCGGGGTCTCCGGGAACGGTGGATGGTTCAGACAGGGCGTGCTCTGATGCGTCCATTTTGCTTACAAAGTTGGCATTGGCAAGGCATAGTTCGGATAATGTGAGCGTGGTTGTGGTTGATTTGAAAAGAGATAGACAATTCAATTGCAGAAACGTCAACAACAACAACAACAACGTTAATTAA 1221 0.4832 MNMVELCCGVVGESESQSPIEPTSRRRSLDVLPFKYIADVAPSQPGSSRKRPKLDLSDCQNAVENRKSVNDDNNQTKKEGDSNVNDHVVSGTEEIEQLPPPKFGITSVCGRRRDMEDSVSVHPFFSQQHFHYFGVFDGHGCSHVATMCKERLHQILNEEIGEAREKNAELEWKQMMEKCFACMDDEVQKRSHNNNQSLRCRCELQTPHCDAVGSTAVVVVVTPDKIIVSNCGDSRAVLCRKGVAIALSSDHKPDRPDEMNRVQSAGGRVINWDVPRVLGVLSMSRAIGDNYLKPYVICEPEVTVTKRSNDDECLILASDGLWDVVSNETACGVVRMCLKAERPALPPGSPGTVDGSDRACSDASILLTKLALARHSSDNVSVVVVDLKRDRQFNCRNVNNNNNNVN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0552 406 MobiDBLite consensus disorder prediction 63 86 - -
Lal3g0552 406 PANTHER PROTEIN PHOSPHATASE 2C 37 40 391 - -
Lal3g0552 406 PANTHER ALPHABET, ISOFORM E-RELATED 40 391 - -
Lal3g0552 406 SMART PP2C_4 89 385 IPR001932 -
Lal3g0552 406 Gene3D - 99 396 IPR036457 -
Lal3g0552 406 Coils Coil 59 79 - -
Lal3g0552 406 CDD PP2Cc 102 344 IPR001932 -
Lal3g0552 406 ProSiteProfiles PPM-type phosphatase domain profile. 102 387 IPR001932 -
Lal3g0552 406 Pfam Protein phosphatase 2C 103 380 IPR001932 -
Lal3g0552 406 SUPERFAMILY PP2C-like 95 388 IPR036457 -
Lal3g0552 406 Coils Coil 153 173 - -
Lal3g0552 406 ProSitePatterns PPM-type phosphatase domain signature. 132 140 IPR000222 GO:0043169
Lal3g0552 406 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0552 Lal-Chr3 4160564 4162318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0552 34 389 PP2C-type Phosphatase Gene Family AT2G29380 54.155 5.23e-132 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0552 K14497 - gmx:100776356 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0552 3 4160564 4162318 Lal3g0552 3 4160564 4162318 ECH
Lal3g0552 3 4160564 4162318 Lal22g0260 22 1645879 1648602 PCT
Lal3g0552 3 4160564 4162318 Lal6g0270 6 1762209 1764336 PCT
Lal22g0260 22 1645879 1648602 Lal3g0552 3 4160564 4162318 PCT
Lal6g0270 6 1762209 1764336 Lal3g0552 3 4160564 4162318 PCT