Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0533 ATGGGCTTATGCACTGATTCCAAGGACTTTTCCAATGCTTCTTCTTCCTCTTTAGTCACAGATCATTACCTTGACTTCAATAAGAAGCTCAAATTTAGAAACTTTCTGAGAAAAATGATCTGGGATTTTGGTTTTGCATGTATTGCCAACCCAAAAAGAGCAAAAAAGAGCTCTGAGAGAAGCCACATTGGCAAAAAGATTGCAACTTTGGAGCACAACAAGGCTTGGTTGTTAGCTGAGTCTGGTGGATGTGGTGCAGAACTCACAAGTTCTGACCCTCAATCTGTTCATTCATCTTTCAGGTTCAGTTTTTGTTCTCAGGTTGAGTTGGAATCACTCAACATGAGTTCTTCAACTGCTGCAACTGTTTTGATGGTGAATTTGGATAATGGGGTGAGTGAATCACGTGCTAGGGAACTCAAATGGAGGAGGATTGAATCATTGGAGAGAACCATATACCCTGTGGCACACTCCTTGATCAGGTTCACCTATGCTGAAATTCTGTCTGCCACACACAATTTCTCCAAAGGTAGAGTGTTGGGGAGAGGAGCATTAAGCTGTGTTTTTAGGGGAAGGGTTGGGATTTTGAGGAATGCTGTGGCAATTAAACGGTTGGACAAGGAAGACAAGGAGTCTGCCAAGGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGCCCCAATGTCGTTCCCCTTGTTGGGTTTTGTATTGACCCTGAAGAGGGTTTGTTCTTGGTGTACAAGTATGTCTCAGGTGGCAGCTTGGAGCGTCACTTGCACGGGAAGAAGTGTAGTTCACCACTTCTATGGTCTGTGAGGTATAAAGTAGCAATTGGGATTGCAGAAGCCATGGCTTATCTGCATAATGGAACTGAAAGATGTGTTGTTCATCGAGACATTAAGCCCTCAAACATTCTGCTTTCATCTAAGAAGACTCCCAAGCTATGTGATTTCGGTTTAGCTACATGGACTTCTGCGCCTTCTGTTCCTTTCCTCTGCAAAACTGTCAAGGGAACATTTGGATATCTGGCTCCCGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTCTATGCTTTTGGAGTGGTTTTATTGGAACTCATAACTGGCCGGAAGCCAATTGAGGCAAAAAGGCCTCCAGGAGAAGAAAACTTGGTCTTATGGGCTAAACCTCTTCTACAGAAAGGTAAAGGAGCCATTGAAGAGTTACTTGATCCGCAACTGAATTGCAGTTTGAGATTCTCGAATCAAATTGGTCAAATGATTGAAGCAGCTGCTGCATGTATAACGAATGAAGAATCTCGGAGACCTGGCATAAATGAGATTATCGCCATACTGAAAGGCGAAGAAGAACCTGTTAAAAGAAAGAAGTCCAGTTTTCTCGGGAATGCATGCGTGCTTGATTGTTATTCTCAATTACAACAAACAAATAATGAGATGAAAAATCACTTGGCTTTGGCAATGCTAGGAGTTTCAGAGTTTGAGGATGATGACTATCTCTATGGTAGTTAA 1524 0.4226 MGLCTDSKDFSNASSSSLVTDHYLDFNKKLKFRNFLRKMIWDFGFACIANPKRAKKSSERSHIGKKIATLEHNKAWLLAESGGCGAELTSSDPQSVHSSFRFSFCSQVELESLNMSSSTAATVLMVNLDNGVSESRARELKWRRIESLERTIYPVAHSLIRFTYAEILSATHNFSKGRVLGRGALSCVFRGRVGILRNAVAIKRLDKEDKESAKAFCRELMIASSLHSPNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGKKCSSPLLWSVRYKVAIGIAEAMAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRPPGEENLVLWAKPLLQKGKGAIEELLDPQLNCSLRFSNQIGQMIEAAAACITNEESRRPGINEIIAILKGEEEPVKRKKSSFLGNACVLDCYSQLQQTNNEMKNHLALAMLGVSEFEDDDYLYGS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0533 507 SMART serkin_6 174 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0533 507 SUPERFAMILY Protein kinase-like (PK-like) 161 455 IPR011009 -
Lal3g0533 507 PANTHER OS01G0750732 PROTEIN 12 505 - -
Lal3g0533 507 Gene3D Phosphorylase Kinase; domain 1 158 251 - -
Lal3g0533 507 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 12 505 - -
Lal3g0533 507 ProSiteProfiles Protein kinase domain profile. 174 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0533 507 Pfam Protein kinase domain 175 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0533 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Lal3g0533 507 Gene3D Transferase(Phosphotransferase) domain 1 252 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0533 Lal-Chr3 3894423 3897726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0533 162 485 Trihelix Transcription Factor Family AT1G70460 40.979 6.60e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal3g0533 Pkinase 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0533 - - gmx:100786826 867.84