Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0508 ATGTCACTACTTTCCTTCACATTCTTCCTCTCTTTTTTCACCACCGTCACTGCCACCCAATTTGACTTTGACACATTAACATTAACCACCCTCAAGCTCATCGGAGACGCTCACCTTACTAAGAATAACACTCTCACCCTCACCGGCCACGCCACCGTCCCCTCCTCCGCCGCCGCTAGAGCGTTTTACTCCCAACCCATCACTTTCCGGCAATCAGGCAACTCTTCTCCGGCGAGCTTCACCACCTTCTTCTCCTTCTCCGTTACCAACCTCAACCCTTCCTCCATCGGCGGCGGACTCGCCTTCCTCATCTCCTCCGATGACAATACCCTCGGCGACCCCAACGGCTCCCTCGGCCTCGCCGGTGCCGGCGACACTTTCTTCGCCGTGGAGTTTGACACTTTAATGGATGTGGAATTCAACGACATCAACGGAAACCACGTTGGTATCGACCAAAACGGCGTCGTTTCAGATAAAGTTTCCGACTTGGGAACAATCGGAATCGATCTCAAGAGCGGTGACGCAATAAACGCCTGGATCGAATTCAACGGAATAACGAAAGTGTTGCGTGTGTGGGTATCTTACTCCAACGTGAAACCAAAAGATCCGATTTTGAAAACGGATATTGATCTGGGTCGGATCCTAAATGAGTTAATGTACGTGGGTTTTTCTGGATCCACCCAAGGTAGCACAGAAGTTCACACTGTACAGTGGTGGAGTTTCACTTCCACCTTTAATTCTCTCTCTCCACCACCTCCAACGGTTACTACTTTCCTGAACCCAACAACAACAACTGCCACGTCAGCACCATCACCAAGGGAGAGTAATAAGTCCACGTGTCACAGTGGGCTTTGCAAGAAGGGTGTGGGAGCAGTAGTTGCTGGTGTTGTAACTGCTGGTGCTTTTGTTCTTGTTTTATTTGCTGGTGCTGTATTGATTTGGGTGAAGAAATTGAAACGTGTCAAGAGGTTTGAATTTGTTTCAATTGGGTTTGGGTCAGAGGTTATAAAAATGCCAAAAGAGTTTAGCTTTAAAGAGATTAAATTGGCTACTAAGTGTTTCAGTAATAATAGGATTATTGGTCATGGTGCATTTGGGACTGTTTATAAGGGAATATTGAAAGAAAGTGGTGATATTGTTGCCGTGAAGAGGTGTAGCCATAGTGGTGGTGATCAGGGTAAGAGTGGGTTTTTGTCTGAGTTGTCTATAATCGGGACTCTTAGGCATAGGAATCTTGTTCCACTTCAAGGTTGGTGCCATGAGAAAGGTAAAATTTTATTAGTATATGAGTTTATGATAAATGGTAGTCTAGATAAGGCTTTGTATGAGTCTAGAATACCTTTACCATGGTGTCATAGGAGAAAAATTTTGTTAGGTGTGGCGTCTGTTTTGGCCTACTTGCATCATGAGTGTGAGAATCAGGTGATTCATAGAGACATAAAGACTAGTAACATAATGTTAGACGAAGGGTTTAATGCTCGGTTGGGTGATTTTGGTTTGGCAAGGCAAATGAAGCATGACAAGTCACCGGATGCTACAGTGGCTGCGGGAACAATGGGGTACTTGGCACCGGAGTATGTCCTTACAGGTAGGGCCACTGAGAAAACCGATGTGTTCAGTTTCGGTGCTGTGGTTCTTGAACTGGCATGTGGGAAAAGGCCTATAGAGAAAGATGTTTATGGGGATCATAGAGTTGGGGGTATTAGCAATTTGGTGGAATGGGTTTGGAGTTTGCACAATGAAGGGAATTTGCTAATGGTGGCAGATCCAAGGCTTGAGGGTGAGTTTGAGGAAGAGGAGATGAGGAAGGTACTCTTGGTTGGGCTAGCTTGCTCACACCCTGATTCAATGGCTAGACCTACAATGAGGAGTGTGGTTCAAATGCTGCTTGGTGAGGCTGAAGTGCCTATTGTCCCCAGAACCAAGCCATCTACTAGTTATAGTACTTCCCATCTCTTAACAAACTTGCAAGATAGTGAATCTGATTTTAATGCTGTAATAACTATCTCTACCTCCTCATCAGATAACAGTTTTAGTGGCAAAGATATGGTCTGA 2055 0.454 MSLLSFTFFLSFFTTVTATQFDFDTLTLTTLKLIGDAHLTKNNTLTLTGHATVPSSAAARAFYSQPITFRQSGNSSPASFTTFFSFSVTNLNPSSIGGGLAFLISSDDNTLGDPNGSLGLAGAGDTFFAVEFDTLMDVEFNDINGNHVGIDQNGVVSDKVSDLGTIGIDLKSGDAINAWIEFNGITKVLRVWVSYSNVKPKDPILKTDIDLGRILNELMYVGFSGSTQGSTEVHTVQWWSFTSTFNSLSPPPPTVTTFLNPTTTTATSAPSPRESNKSTCHSGLCKKGVGAVVAGVVTAGAFVLVLFAGAVLIWVKKLKRVKRFEFVSIGFGSEVIKMPKEFSFKEIKLATKCFSNNRIIGHGAFGTVYKGILKESGDIVAVKRCSHSGGDQGKSGFLSELSIIGTLRHRNLVPLQGWCHEKGKILLVYEFMINGSLDKALYESRIPLPWCHRRKILLGVASVLAYLHHECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQMKHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSFGAVVLELACGKRPIEKDVYGDHRVGGISNLVEWVWSLHNEGNLLMVADPRLEGEFEEEEMRKVLLVGLACSHPDSMARPTMRSVVQMLLGEAEVPIVPRTKPSTSYSTSHLLTNLQDSESDFNAVITISTSSSDNSFSGKDMV 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0508 684 SMART serkin_6 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0508 684 Gene3D Transferase(Phosphotransferase) domain 1 432 636 - -
Lal3g0508 684 Gene3D Phosphorylase Kinase; domain 1 339 431 - -
Lal3g0508 684 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Lal3g0508 684 ProSiteProfiles Protein kinase domain profile. 354 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0508 684 PANTHER - 9 675 - -
Lal3g0508 684 Pfam Legume lectin domain 19 246 IPR001220 GO:0030246
Lal3g0508 684 SUPERFAMILY Protein kinase-like (PK-like) 336 667 IPR011009 -
Lal3g0508 684 Pfam Protein kinase domain 355 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0508 684 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 9 675 - -
Lal3g0508 684 CDD lectin_legume_LecRK_Arcelin_ConA 35 245 IPR001220 GO:0030246
Lal3g0508 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 252 IPR013320 -
Lal3g0508 684 Gene3D - 17 250 - -
Lal3g0508 684 CDD STKc_IRAK 360 629 - -
Lal3g0508 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0508 Lal-Chr3 3642325 3644379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0508 1 666 Receptor kinase-like Gene Family AT3G53380 62.931 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal3g0508 Pkinase 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0508 - - var:108341139 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0508 3 3642325 3644379 Lal18g1304 18 15569780 15571876 PCT
Lal3g0508 3 3642325 3644379 Lal22g0297 22 1885891 1888005 PCT
Lal3g0508 3 3642325 3644379 Lal6g0323 6 2080229 2082313 PCT
Lal18g1304 18 15569780 15571876 Lal3g0508 3 3642325 3644379 PCT
Lal22g0297 22 1885891 1888005 Lal3g0508 3 3642325 3644379 PCT
Lal6g0323 6 2080229 2082313 Lal3g0508 3 3642325 3644379 PCT