Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0507 ATGCAGAATCGATGTGTTAACATGATAGCTCATCTTTTTAATGCACCACTTCAAGAGTCTGAGACTGCAACTGGTGTTGGCACTGTTGGTTCATCAGAGGCCATAATGTTGGCTGGATTGGCATTTAAAAGAAAGTGGCAAAACAGAAGAAAAGAAAAAGGAAAACCTTATGACAAACCCAACATAGTTACTGGAGCCAATGTCCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAAGTGGAGTTGAAAGAGGTGAAGCTTCGTGATGGATACTATGTAATGGACCCTGAAAAAGCTTTGGAATTGGTGGATGAGAACACCATTTGTGTTGCTGCTATTCTTGGTTCCACACTAAATGGAGAGTTTGAAGATATCAAGCGCATAAATGATCTTCTAATTCAAAAGAATAAGGAAAATGGATGGGACACTCCTATTCATGTGGATGCAGCAAGTGGTGGCTTCATTGCCCCATTTCTTTATCCAGAGCTTGAGTGGGACTTTCGTTTACCACTAGTAAGGAGCATCAATGTTAGTGGCCACAAATATGGTCTAGTCTATGCTGGAATAGGTTGGGTTATCTGGAGAAATAAGGAAGATTTGCCTGAAGAACTCATCTTCCATATCAACTATCTTGGATCTGATCAACCCACCTTCACCCTCAACTTTTCCAAAGGTTCTAGCCAAGTTATTGCTCAATATTACCAACTAATTCGCCTTGGTTATGAGGGATACAAAAATGTGATGGAAAATTGCAGAGACAACATGTTAGTACTGAGGGAGGGACTTGAGAAAACAGGGCGATTTGAAATTGTATCAAAAGAGGAAGGTATTCCTTTGGTGGCCTTCAGTTTGAAGGACAACAGCCACTTTGATGAATTCCAAATCTCAGATTTCCTCAGGCGCTTCGGGTGGATCGTGCCAGCATACACTATGCCACCAGATGCTCAACATGTGACCGTGCTCCGTGCTGTCGTTAGAGAAGACTTCTCAAGGACCCTCGCTGAACGTCTCATAGTTGATATCGAGAAAGTGCTGCATGAACTTGATTTATTTCCTTCAAAGGTGTTGGCTAGCACCAGTGTAACAGATACAGAAAGTGTTAACAGCAATGACAAAGTTAAGAACACTGATATTGAGACACAAAGGGAAATGGCCTTGGTTTGGAATAAGTATTTGTTGGAGAGGAAGAAGCTCAATGATAAGATGAATGTTGTTTGTTAA 1224 0.4134 MQNRCVNMIAHLFNAPLQESETATGVGTVGSSEAIMLAGLAFKRKWQNRRKEKGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKALELVDENTICVAAILGSTLNGEFEDIKRINDLLIQKNKENGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVRSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGSDQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKNVMENCRDNMLVLREGLEKTGRFEIVSKEEGIPLVAFSLKDNSHFDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRAVVREDFSRTLAERLIVDIEKVLHELDLFPSKVLASTSVTDTESVNSNDKVKNTDIETQREMALVWNKYLLERKKLNDKMNVVC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0507 407 Gene3D - 266 352 - -
Lal3g0507 407 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 286 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lal3g0507 407 PANTHER GLUTAMATE DECARBOXYLASE 1 407 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lal3g0507 407 PANTHER GLUTAMATE DECARBOXYLASE 1 407 - -
Lal3g0507 407 SUPERFAMILY PLP-dependent transferases 1 349 IPR015424 -
Lal3g0507 407 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 1 349 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lal3g0507 407 Gene3D - 1 265 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0507 Lal-Chr3 3639523 3644477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0507 1 398 Calmodulin-binding Proteins AT5G17330 79.851 0.0 689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1217 5 14929793 14938623 Lal3g0507 3 3639523 3644477 LSH