Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0501 ATGGTTTCTGCTTCTATGGTGATTCAGGATCAAAGTGATGTTACTGGATTAGAGAATGGTCCTCCTGAAGGAGATGAAGTATCCATGAGTTCTGGACTGCATTCTGTTGCACACTTTCAACTAAATGATCAAATTTCTTGCGGAAATGACTATGCTCCAAAGGTAAGGAAACCATATACTATCACAAAACAGCGAGAGCGATGGACTAATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGCTCTATGGTCGGGCCTGGCGACGCATCGAAGAACATGTTGCCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTATAAGGTTCTCCATGACTCTAGTGGGAACATAACAAACTCAGTTGAGTCTATTGAAATCCCTCCTCCTAGACCGAAAAGAAAGCCAATGCATCCTTACCCTCGTAAGCTAGTAATGACCCCTAATAAAGAAACTTCCATCCTAGAGCAGCCAACGAGATCTTCTTCTCTAAAGTCATCAGATTTTGATCAAGAAAACCAAACTCCCAAATCGGTATTATCTGCACTTGGTTCAGACAGCAGCCTTGGTTCTTCTGATTCAGATACACCAAATGAAAGTTTATCCCCGATGTCATCCATTGGTGGTGTCCATAAGACTACATTTTCACTTTCGGAACCCAAAACACCTTTTGAGGAACGTGGACTAAATGCTTATTCAGCTCATGATGAGAAACCTCTTGTGAAATTTGGGCTTTTCCCCGAAGGAAGTGTTTCTATCAAAGAAGACACAGCAGAAGAATCTTCTGGCCGGACTCTCAAACTTTTTGGGATGACTCTAATGGTATCAGAGACATGCAGATCATCCTCTCCAACAACTAAAACATGCAAACCAACAATTGTGCATTGCTTTAGCAAGGAGGATGAAAATTTGGAACTTCTTGCCCACAGTACACCAAGTGAAACATCAGCAATATCGAAGCTAAGGGTGAGAGTGAGACCTGAAACGAGTGCACAAGGGTTTGTGCCATATAAAAGGTGCATTGCAGATAGAGAAAACCAGTCTTCATCTTTAACCAAGGATAAGCGAGAAGTGCAACGCATCAGACTTAGCTTATAG 1107 0.4164 MVSASMVIQDQSDVTGLENGPPEGDEVSMSSGLHSVAHFQLNDQISCGNDYAPKVRKPYTITKQRERWTNEEHKKFLEALKLYGRAWRRIEEHVATKTAVQIRSHAQKFFYKVLHDSSGNITNSVESIEIPPPRPKRKPMHPYPRKLVMTPNKETSILEQPTRSSSLKSSDFDQENQTPKSVLSALGSDSSLGSSDSDTPNESLSPMSSIGGVHKTTFSLSEPKTPFEERGLNAYSAHDEKPLVKFGLFPEGSVSIKEDTAEESSGRTLKLFGMTLMVSETCRSSSPTTKTCKPTIVHCFSKEDENLELLAHSTPSETSAISKLRVRVRPETSAQGFVPYKRCIADRENQSSSLTKDKREVQRIRLSL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0501 368 SUPERFAMILY Homeodomain-like 59 112 IPR009057 -
Lal3g0501 368 Gene3D - 67 113 - -
Lal3g0501 368 PANTHER SWI/SNF COMPLEX-RELATED 34 322 - -
Lal3g0501 368 PANTHER SWI/SNF COMPLEX-RELATED 326 355 - -
Lal3g0501 368 MobiDBLite consensus disorder prediction 123 225 - -
Lal3g0501 368 MobiDBLite consensus disorder prediction 1 16 - -
Lal3g0501 368 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Lal3g0501 368 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Lal3g0501 368 SMART sant 64 112 IPR001005 -
Lal3g0501 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Lal3g0501 368 CDD SANT 67 110 IPR001005 -
Lal3g0501 368 MobiDBLite consensus disorder prediction 153 223 - -
Lal3g0501 368 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Lal3g0501 368 MobiDBLite consensus disorder prediction 1 29 - -
Lal3g0501 368 PANTHER PROTEIN REVEILLE 7-RELATED 326 355 - -
Lal3g0501 368 PANTHER PROTEIN REVEILLE 7-RELATED 34 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0501 Lal-Chr3 3577756 3581307 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal3g0501 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0501 - - lang:109345156 621.698