Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0489 ATGGCTTACTTACCTATAACCCACGAGTTTCACAATATTTGTACTAATTTAACTCTAGGTGCATGCCCTAATAAGAAGGGAAAAGCTTGTCCCTCTACCTCTTCTTCCTCCATGAATGCTTCTGTTGTAGCTGATGGAATAAATAGAGGTCGTAACAACGAAGCAGAAGAGAGAGTATGGGGCTACTCAATGGAACTGAAGTTATATGATGATCCATGGAAGATAAAGAAAGTGATGACAGAAAGTGATCTTGGCCACTTAAGCAGATTCTTGTTACCTAAAGAAATGGCTGAGGATTTGGTTCTTTCTGTATTGAGTCTTAGGGCACAAAGAGAAGCAATGACAGAAAGAGGAACAACTATTATGATATGGGATATAGATACAAGTTCCATGCACTCTCTTGTTTTCAAGAAATGGCTTTCTTCAAGAAGTTATGTTTTTCTTGATAAGTGGAATCAATCTTTTGTGAAGAGAAGAAATTTGCAAAAGGGTGATGAGATTGGACTTCATTGGGATCCTTCTAGAGATTGCTTTAACTTCAGTAATATATATGACAGATCACATGGGATGGGATTTTATTATGTGATTGATCTATCTTATGAGATTAAAAGAGTGCAATTTGTTAGTGTCAAAGGGTGA 639 0.3678 MAYLPITHEFHNICTNLTLGACPNKKGKACPSTSSSSMNASVVADGINRGRNNEAEERVWGYSMELKLYDDPWKIKKVMTESDLGHLSRFLLPKEMAEDLVLSVLSLRAQREAMTERGTTIMIWDIDTSSMHSLVFKKWLSSRSYVFLDKWNQSFVKRRNLQKGDEIGLHWDPSRDCFNFSNIYDRSHGMGFYYVIDLSYEIKRVQFVSVKG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0489 212 SUPERFAMILY DNA-binding pseudobarrel domain 71 176 IPR015300 -
Lal3g0489 212 Gene3D - 72 188 IPR015300 -
Lal3g0489 212 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 16 181 - -
Lal3g0489 212 CDD B3_DNA 73 181 IPR003340 GO:0003677
Lal3g0489 212 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 16 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0489 Lal-Chr3 3453453 3454374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0489 75 172 B3 DNA Binding Superfamily AT3G24650 30.612 5.47e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0489 - - lang:109344557 312.768