Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0485 ATGCTAACCATAGAAACCCAAAAGGAAAATAAGTTGCTTTCAGTAATGGGTACCCATATTTTAAAGTTTCTAAGCAAACACCCATTTCGTGTTTCGATATCCATTCGATCAAAAACAACGTCTACTCAGTATGTAGAATCTAGAGCTCGAGACCCCACGTTTGAGAAGCTCATGGAAAAGTACAAAGAGCTTCTCAAAGTTGTTTCCATTCAAGACCTCATCCTTGCAAACCCCAAGAACCAATCACTCTCCATTGAGTTCCTCTCCAGGCTCTCCCAGAGGCTCCACCTCAACCGAGGTGCAACTGCCTTCCTCTGCAAGTATCCTCACATTTTTGACATTTACTATGATCCCGCAAAGTCACAGCCTTTTTGCAGATTAACCGATGCTGCCCTTGATGTTTCACGTCAGGAAGCAAAAGCCATTGGTGATTCTATGCCCATTGTCATTGATAGACTTGTTCGGATATTGGCCATGTCTGCATCCAGAACAGTACCTCTTCGTGCCATTTTTAAGGTTTGGAGGGAGCTTGGGCTGCCTGATGATTTTGAGGACACAGTTATAGCTGCAAAGCCTAATGTTTTTCAGCTTTGTGATGCACATGAACGAAATACTCATTTGTTGAAGCTCGTGGATGGTGCTCTTCCCAGTGACCATTTTAAAGCAGCTGTTGAAGATTGGAGGGTTGTTGAGTGCTGCAAGAAGGATTGCAGTGTTGATAGGACTGAATTGCAGTTTAGTTTCAAACATGGGTATCCTCCAGGGATGAGGCTGAGCAAGAATTTTAGGGCGAAGGTGAAGGAATGGCAGAGTTTGCCATATGTGGGGCCTTATGAAGAGGTGGTTGGTCAGAAGAAGTCTAAGGCTGGAATGGTGGCTTCAGAGAAACGAGCAGTGTCGATTGTTCATGAGTTCCTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATTAGCCAATTCAGAAAATGGTTTGGGATTGATTTAAACATAAGGGATCTATTCCTGGATCACCCTGGGATCTTCTATTTGTCAACTAAGGGGAAACGCCATACTGTTTTCTTGAGGGAAGCTTATGAACGAAGGTGCTTAATTGAACCAAATCCTGTGTATGATGCAAGGAGAAAGCTTCTTGATCTTGTTCTTTTAGGGCGTCGAGGTCTGCCTGCTGTTAATTCAAAGCCACATGATAATAGCAGCGGCAACGAGGTTGGGAAAGAGGACAACCAGCAAAGACGTGAGTCACATGACTTGTTTTCATCTTGA 1269 0.4389 MLTIETQKENKLLSVMGTHILKFLSKHPFRVSISIRSKTTSTQYVESRARDPTFEKLMEKYKELLKVVSIQDLILANPKNQSLSIEFLSRLSQRLHLNRGATAFLCKYPHIFDIYYDPAKSQPFCRLTDAALDVSRQEAKAIGDSMPIVIDRLVRILAMSASRTVPLRAIFKVWRELGLPDDFEDTVIAAKPNVFQLCDAHERNTHLLKLVDGALPSDHFKAAVEDWRVVECCKKDCSVDRTELQFSFKHGYPPGMRLSKNFRAKVKEWQSLPYVGPYEEVVGQKKSKAGMVASEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERRCLIEPNPVYDARRKLLDLVLLGRRGLPAVNSKPHDNSSGNEVGKEDNQQRRESHDLFSS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0485 422 Pfam Plant organelle RNA recognition domain 50 386 IPR021099 GO:0003723
Lal3g0485 422 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 21 413 IPR045040 GO:0003723
Lal3g0485 422 MobiDBLite consensus disorder prediction 401 422 - -
Lal3g0485 422 PANTHER OS04G0618900 PROTEIN 21 413 - -
Lal3g0485 422 MobiDBLite consensus disorder prediction 392 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0485 Lal-Chr3 3434084 3436516 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0485 - - gmx:100808404 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0485 3 3434084 3436516 Lal12g0585 12 4190478 4194050 PCT