Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0466 ATGTGTTTACTATGTGGTTTCAGCTCTGAAACTATGAGTTCATTTCAGGGAAATATGAAGGCTGGCAAAGTTTCCTCTGAATTTAAGTCTCGATATCCTATTCCTCGCAGCAAACAAGTCTCCATGAAGTTCTATTCTACTTCAGTGGCTACTTTCCTTTTTATCATAGTTATCCTTTTTCCTCTGGCTATCGCTGACCTAAATTCAGATAAGCAAGCCCTTCTTGATTTTGCTACTGCTATCCCCCACCGCCGAAACCTCATGTGGAATCCAGCCACCTCTATTTGTACATCTTGGGTAGGCATCACTTGCAATCAAAATAGAACTCGTATTATTAGTGTCCGGCTCCCTGGAGTTGGACTATGGGGCTCCATCCCAGCCAATACACTTGGCAAGCTTGATGCCGTGAAGATTATTAGCCTTCGCTCCAACCTTCTCGTTGGAAATCTGCCTGATGACATTGCTTCTCTTCCTTCTCTCAAGTATCTCTACCTTCAGAATAATAACCTTTCTGGTGATATACCTTCCTCATTGTCACCCAAACTCAATATACTTGATTTGTCATATAATTCCTTCACTGGTGGCATTCCGAAGATTTTTGCAAATTTTACGGAACTAACTAGTTTGTATCTCCAAAACAACTCACTATCTGGTGATATACCTAATCTCAATGTTACTAATCTCAGGCTTTTGAATTTAAGCTATAACCATTTGAATGGCTCTATCCCTGAAGCTCTTCAGATTTTTCCTAATTCATCCTTTGAAGGAAACTCTCTTTTATGTGGATTACCTTTAATGCCATGCTCCACAGTTTCCCCTACACCTAGTCCTTCTTTCACTTCAGCTCCATCTGCAGCTCCTGGAGGAAAAGGCTCCAAAAACAAACTGAGTAAGGTAGCTATCATTGCAATTGCTGTTGGTGGAGCAGTCGTGCTATTTTTCGTAGCTCTTGTTATTGTTCTTTGCTGTATAAAGAAGAAAGATGGTCAAGGCTCCCATGAAAATAAAGACAAGGGTCCTAGTGGTGGTAGAGGTGAGAAGCCAAAAGAAGAGTTTGGGAGTGGGGTCCAAGAACCTGAGAAAAACAAGTTGGTTTTCTTCGAGGGCAGTTCTTATAATTTTGATCTTGAAGATTTGCTAAGAGCTTCAGCCGAAGTTTTGGGAAAGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCAGTAACAGTTGTGGTGAAAAGGTTGAAAGAAGTTGTGGTAGGAAAGAGGGACTTTGAACAGCAGATGGAGATTATAGGGAGGATTGGACAACACCTAAATATTGTGCCACTTCGTGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCAAGGTGGCAACCTATCCACACTCTTGCATGGAAACAGATCAGGTGGAGGAACACCGTTAGATTGGGATTCACGAGTAAAAATATCTCTAGGAACTGCTAGAGGAATTGCCCACATACATTCTGTTGGTGGTCCAAAACTCGCACATGGAAATATTAAGTCCTCAAATGTCCTCCTCAGCCAAGATAATGATGGCTGCATTTCTGATTTTGGCTTAACTCCGCTTATGAATGTTCCTACAACCCCTTCTAGAGCCGCAGGATATCGTGCTCCAGAGGTGATTGAAACGCGTAAGCACACTCACAAATCAGATGTGTACAGCTTTGGTGTCCTCCTTCTGGAGATGCTAACTGGGAAAGCACCTATCCAATCTCCCGGACGCGATGACATGGTTGATCTCCCTAGGTGGGTGCAGTCAGTTGTTAGGGAGGAATGGACTGCTGAGGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATAGGCATGGCTTGTGTAGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGTAGTGAAAATGATTGAGGAAATCCGGCAATCGGACTCAGAGAACCGACCGTCTTCAGAAGAGAATAAATCCAAGGACTCAAATGTTCAGACTCCATAA 2031 0.422 MCLLCGFSSETMSSFQGNMKAGKVSSEFKSRYPIPRSKQVSMKFYSTSVATFLFIIVILFPLAIADLNSDKQALLDFATAIPHRRNLMWNPATSICTSWVGITCNQNRTRIISVRLPGVGLWGSIPANTLGKLDAVKIISLRSNLLVGNLPDDIASLPSLKYLYLQNNNLSGDIPSSLSPKLNILDLSYNSFTGGIPKIFANFTELTSLYLQNNSLSGDIPNLNVTNLRLLNLSYNHLNGSIPEALQIFPNSSFEGNSLLCGLPLMPCSTVSPTPSPSFTSAPSAAPGGKGSKNKLSKVAIIAIAVGGAVVLFFVALVIVLCCIKKKDGQGSHENKDKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESVTVVVKRLKEVVVGKRDFEQQMEIIGRIGQHLNIVPLRAYYYSKDEKLLVYDYVQGGNLSTLLHGNRSGGGTPLDWDSRVKISLGTARGIAHIHSVGGPKLAHGNIKSSNVLLSQDNDGCISDFGLTPLMNVPTTPSRAAGYRAPEVIETRKHTHKSDVYSFGVLLLEMLTGKAPIQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIGMACVAKMPDMRPSMDEVVKMIEEIRQSDSENRPSSEENKSKDSNVQTP 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0466 676 Pfam Leucine rich repeat N-terminal domain 68 105 IPR013210 -
Lal3g0466 676 CDD STKc_IRAK 387 652 - -
Lal3g0466 676 Pfam Protein kinase domain 384 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0466 676 SUPERFAMILY L domain-like 71 268 - -
Lal3g0466 676 MobiDBLite consensus disorder prediction 650 667 - -
Lal3g0466 676 MobiDBLite consensus disorder prediction 329 356 - -
Lal3g0466 676 Pfam Leucine Rich Repeat 159 179 IPR001611 GO:0005515
Lal3g0466 676 Pfam Leucine Rich Repeat 227 247 IPR001611 GO:0005515
Lal3g0466 676 Gene3D Transferase(Phosphotransferase) domain 1 457 675 - -
Lal3g0466 676 Gene3D Ribonuclease Inhibitor 67 222 IPR032675 -
Lal3g0466 676 MobiDBLite consensus disorder prediction 650 676 - -
Lal3g0466 676 ProSiteProfiles Leucine-rich repeat profile. 205 227 IPR001611 GO:0005515
Lal3g0466 676 Gene3D Phosphorylase Kinase; domain 1 349 456 - -
Lal3g0466 676 ProSiteProfiles Protein kinase domain profile. 381 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal3g0466 676 ProSitePatterns Protein kinases ATP-binding region signature. 387 418 IPR017441 GO:0005524
Lal3g0466 676 PANTHER LRR RECEPTOR-LIKE KINASE 30 676 - -
Lal3g0466 676 ProSiteProfiles Leucine-rich repeat profile. 159 181 IPR001611 GO:0005515
Lal3g0466 676 PANTHER OS05G0588300 PROTEIN 30 676 - -
Lal3g0466 676 SUPERFAMILY Protein kinase-like (PK-like) 385 659 IPR011009 -
Lal3g0466 676 Gene3D Ribonuclease Inhibitor 223 269 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0466 Lal-Chr3 3210225 3214467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0466 41 674 Receptor kinase-like Gene Family AT5G58300 68.232 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal3g0466 Pkinase 8.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0466 - - gmx:100796171 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0466 3 3210225 3214467 Lal3g0466 3 3210225 3214467 ECH
Lal5g1256 5 15317657 15320229 Lal3g0466 3 3210225 3214467 LSH
Lal3g0466 3 3210225 3214467 Lal18g1285 18 15440512 15445296 PCT
Lal18g1285 18 15440512 15445296 Lal3g0466 3 3210225 3214467 PCT