Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0465 ATGGCGGAGCTACAGCGATCAACCAGCAAACCGGCCATAATGAAAGACCCATCGGCCGGAAGCATCCCGAAGCAATCAGGCCGCCGTGTTGCCTTTGAGGCCCCCTCCAACAACCGCTACTCCGGCCTATGCGACATTGATTCTAACATTATCAACCATGACAAGCGAAGGTTCAACCGATGTTGCTCCACATTTTGTGTGTGGTCATGTCTTTCTTTGTTCATCCTCATCATCATCTTTGTCTTCATTGCCATCTCCTACTTGATCTTACTCCAAGCAGGATTGCCCAAAATCAATGTTAGGTCCTTAAACATTACCAAGTTGGAGCTTGATAATAACTCACAAAACCTGAATGCAGCTATAGGTTTAGGTATAAGGATTACAAATAAGAATGAGAAGACAGTGATTTTGTATGGTCCTCTTTCTGTTGATGTTGTTAGTGAGGATGTGCCACTAGGGAATGCTAAAGTTGGAAGATTCTCTCAAGAGGCACAAAATGAGACCAATTTGGATTTGAAAATGACAATGAACAATGTTATGGTTGATAAGGATGCTGTGGATTCTCTTAAATCAGATATTGATGCTAAAGAGATGGTTTTTGATGTTTATGTTGGTGGGTACATTGGTTTTAAGATTGGAAATATGCATATGACTAATGTCCCTTTTCTATCATCTTGTCATGAAATCAAGCAAATGGATGTGGATTTTGGAAGAAGACCTGCATGCCTAAAAGTAACTGATGAAAAAAATTACAAGCAAATTTTGCTTTTGGCAAAATTTGATGTCACCAATGTGCTCATGGCAGATGAAGCACACAATGATCTGAAGGAGGAGGTTCCAGAAGTTGTGCCATTTGATCCTACTAAGAAGAAGAAGAAAAAGAAAATTACAATTGTGGATCCTGCTGATGATTCAGTGGATAAATTGGCTGAAAAGACAGAAAATCTGTCAGTTAGCTTTTCACTTGCAGTTACTGAAGGGGCTGAGAGTACATTTGCTGGTTTAAAAAAGAAGAAAAAGAAGCAGGTTGAAATCAGTAACTTGAATGATGAGAGTGGAGATGCAACTGAAGATTTGGATGCCTTGGATCCTGTTGAAGAAGAGGAAGGAGACATTGCTTCCTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATGAATATGAGGAGCTTCTGGGCAGGGTCTTTAACATTCTACGTGAGAATAATCCTGAACTTGCTGGAGACCGGCGGAGGACTGTTATGAGGCCTCCACAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCCTGCTTGCTGAGCTAGGTACGAGTGGCTCTCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGGCGATACATCAATGAATATGTTATTTGTCTCGGATGCAAAAGTCCTGACACGATACTTAGTAAGGAAAACCGCCTGTTCTTTCTTCGGTGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTCGTTGCTCGCGTCGGCCGTAGAAATGCGGGAACATAA 1629 0.4205 MAELQRSTSKPAIMKDPSAGSIPKQSGRRVAFEAPSNNRYSGLCDIDSNIINHDKRRFNRCCSTFCVWSCLSLFILIIIFVFIAISYLILLQAGLPKINVRSLNITKLELDNNSQNLNAAIGLGIRITNKNEKTVILYGPLSVDVVSEDVPLGNAKVGRFSQEAQNETNLDLKMTMNNVMVDKDAVDSLKSDIDAKEMVFDVYVGGYIGFKIGNMHMTNVPFLSSCHEIKQMDVDFGRRPACLKVTDEKNYKQILLLAKFDVTNVLMADEAHNDLKEEVPEVVPFDPTKKKKKKKITIVDPADDSVDKLAEKTENLSVSFSLAVTEGAESTFAGLKKKKKKQVEISNLNDESGDATEDLDALDPVEEEEGDIASLQPRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0465 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 267 542 - -
Lal3g0465 542 Pfam Domain found in IF2B/IF5 412 520 IPR002735 GO:0003743|GO:0006413
Lal3g0465 542 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 387 494 IPR016189 GO:0003743|GO:0006413
Lal3g0465 542 Gene3D - 385 527 - -
Lal3g0465 542 MobiDBLite consensus disorder prediction 1 27 - -
Lal3g0465 542 SMART eIF2Bneu4 412 521 IPR002735 GO:0003743|GO:0006413
Lal3g0465 542 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 491 526 IPR016190 GO:0003743|GO:0006413
Lal3g0465 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 267 542 IPR045196 GO:0003743|GO:0006413
Lal3g0465 542 Pfam Late embryogenesis abundant protein 125 211 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0465 Lal-Chr3 3203136 3209462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0465 267 538 Eukaryotic Initiation Factors Gene Family AT5G20920 76.277 3.62e-132 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0465 3 3203136 3209462 Lal3g0465 3 3203136 3209462 ECH
Lal5g1257 5 15321050 15321772 Lal3g0465 3 3203136 3209462 LSH