Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0443 ATGACATTCTTTAACCATACAGAAATCGAAGTTTGGACCGACTTCTTCATGGACTTTTTTCACTTTAAAAGTAACTTTGGTCAATTAAAAAACGAGGAAGAAGTAGTTTATTTTATAGCAGAACATTGGAGAGACATTACAGAGATGGAAGAAGAACTGAACGTGAATAATGAAACACTAGAGGGATTAGATGACTATAATGGTAGTGAAGAAGAAAATGTGAATGAAATAGAGGGGTTAGATTTTGAAGAGATTGATTTTCGATTACTAAATGAAGATGAAGTGAAAAAATATCGGGTTTTAAACAATGAAATTGCATACAAATTTTATAAGATGTATGGAATGAAGAAAGGATTTGGCATTAGAAAATATCATATTCGGCGAGACAAGGATGGTGAGATTTTGTGGCAATCCTTTTTTTGTGATATTGAAGGATTTAGAGATAAAAAAAATGATTTGATTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCATATTGACAAGGAGAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAACTCGTTGGTGAATATTATGGTGCAATGATAACCTCTAACCGAAGAATGACAGAGACAGATGTGGCTCAGATGAACACAATGAGAGAAGTGGATGGATGTAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTTACTTTTGATGCAACTTATGGTCGAAACAAATATAAGTTTCCACTTGTTATATTTTCTGGTGTTAATCATCACAAACAAACAACTGTGTTTGCTGCTACTGTTGTGTCAAATGAGACAGAGGAAACATACGTATGGCTTTTGGAGAAATTTTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATAACTGATGGTGATTTGTCCATGAAGAATGCAATTAGAAGAGTTTTTCCCGAAGTCCATCATAGGTTGTGTGCTTGGCATATTTGTAACAATGCTGGAAAAAATATAAAGAAAAATAATTTTCATAAGGATTTCCAAAAAGTGATGTATGCGGATGTAGAGATTGAAGATTTTAATATGATGTGGGAGGAACTTATTAACAAGCATGGACTTCATAACAATGCATGGGTGGCTTAG 1140 0.3404 MTFFNHTEIEVWTDFFMDFFHFKSNFGQLKNEEEVVYFIAEHWRDITEMEEELNVNNETLEGLDDYNGSEEENVNEIEGLDFEEIDFRLLNEDEVKKYRVLNNEIAYKFYKMYGMKKGFGIRKYHIRRDKDGEILWQSFFCDIEGFRDKKNDLIRKRAPRKETRCGCLARMKIHIDKEKGDWYVSYFVDEHNHELVGEYYGAMITSNRRMTETDVAQMNTMREVDGCSIFDYSIFGDVLTFDATYGRNKYKFPLVIFSGVNHHKQTTVFAATVVSNETEETYVWLLEKFLEAMNGKHPKCVITDGDLSMKNAIRRVFPEVHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIEDFNMMWEELINKHGLHNNAWVA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0443 379 Pfam MULE transposase domain 238 332 IPR018289 -
Lal3g0443 379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 106 224 IPR031052 GO:0006355
Lal3g0443 379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 225 378 IPR031052 GO:0006355
Lal3g0443 379 Pfam FAR1 DNA-binding domain 108 196 IPR004330 -
Lal3g0443 379 PANTHER OS02G0262500 PROTEIN 225 378 - -
Lal3g0443 379 PANTHER OS02G0262500 PROTEIN 106 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0443 Lal-Chr3 3072592 3074362 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal3g0443 MULE 1.3e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0443 - - ahf:112728364 257.684