Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0441 ATGGTGCGGGTTTTTTGTGTAGGAAACAGAGAATCGATCAGAGATAAAAAAAACATAGCAGACAATAGAATTGCCACACAAATGCAACACTCTCCTTCACAACCTAACCCTAATCCCAATGCACATTTACCGCAACCACATTCTTCATCTCCGGCCACGGCGGCGACGCCCTTCGCTTTCATCCGCGGCTCTACTGACGCTGCCGGAGAGTTCCACTCCCACCATCGGAGATCCCATTCAGAGATGGTTTTCCGGCTACCGGACGAAATGATGGACCTGTCGCCGTCCGATCCGTTCAATGGCGGTTCCTCCACCGCCAGCCTGGAAGAGATCGGATCGGAGGACGACCTCTTCTCCACCTACATTGACGTCGAGAAGCTCGGTGGAACAACGAATGGTTCGAGTGGCGCCGAAAACATTTCCGATCAGTGTGGTTACGGTAATACCAACGGCGGCTCCGGCACGTGCGATGGAACGACCGGTTACAATGAAGGAGAGAATAGCCCAAGCGCTGCTGCGAGGTCGAGGCACAGACATAGCAGCTCCGTCGACGGTTCCACGTCGACGAGCATGTTGGGAGAAATCATGGAGGCGAAGAAAGCAATGCCTCCTGATAAGCTCGCAGAATTATGGACCATTGATCCAAAACGTGCTAAGAGAATACTAGCGAATCGGCAATCTGCTGCACGCTCAAAAGAGAGAAAAGCATACTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAAACTGAAGCCACAACTCTTTCTGCCCAACTGACACTATACCAGAGGGACACAACTGGTCTGAGTTCTGAAAATACTGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAAGCACAACTTCGCAATGCTCTTAATGATGCGTTGATGACGGAAGTTGAGAGGCTTAAGATTTCTACGGGGGAGGCAATGAATCCCTCCGAGTCTTTTAATATGGGAGTGCACCAGATGCCGTTTGCAGGATCAAAATTATTTTCAATCCCACCACACTCAGGTTCTTCTGGTCATCAGAACATGCAGTTCCCTCCATTTGGTCACTCCCCATCTACCATGCCAACTCATCAACTGCAACAATCAAATTCTCAGCAACTATCGGACATGTTGCAAAATGATCAACTCGGTCCTTTACAGGGACTTGACATCACATTAGTGGCAAAGGATCAAGCCTCGTGA 1200 0.4958 MVRVFCVGNRESIRDKKNIADNRIATQMQHSPSQPNPNPNAHLPQPHSSSPATAATPFAFIRGSTDAAGEFHSHHRRSHSEMVFRLPDEMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGGTTNGSSGAENISDQCGYGNTNGGSGTCDGTTGYNEGENSPSAAARSRHRHSSSVDGSTSTSMLGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKAYYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRNALNDALMTEVERLKISTGEAMNPSESFNMGVHQMPFAGSKLFSIPPHSGSSGHQNMQFPPFGHSPSTMPTHQLQQSNSQQLSDMLQNDQLGPLQGLDITLVAKDQAS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0441 399 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 24 392 - -
Lal3g0441 399 Gene3D - 215 267 - -
Lal3g0441 399 PANTHER BZIP TRANSCRIPTION FACTOR 24 392 - -
Lal3g0441 399 CDD bZIP_plant_RF2 217 266 IPR044759 GO:0003700|GO:0006355
Lal3g0441 399 SUPERFAMILY Leucine zipper domain 216 270 IPR046347 GO:0003700|GO:0006355
Lal3g0441 399 Coils Coil 239 259 - -
Lal3g0441 399 MobiDBLite consensus disorder prediction 336 385 - -
Lal3g0441 399 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 214 277 IPR004827 GO:0003700|GO:0006355
Lal3g0441 399 MobiDBLite consensus disorder prediction 157 189 - -
Lal3g0441 399 SMART brlzneu 212 276 IPR004827 GO:0003700|GO:0006355
Lal3g0441 399 MobiDBLite consensus disorder prediction 335 387 - -
Lal3g0441 399 MobiDBLite consensus disorder prediction 28 53 - -
Lal3g0441 399 Pfam bZIP transcription factor 216 274 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0441 Lal-Chr3 3058907 3062274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0441 32 391 bZIP Transcription Factor Family AT2G40620 49.610 2.54e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal3g0441 bZIP_1 2.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0441 - - gmx:100775607 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0441 3 3058907 3062274 Lal3g0441 3 3058907 3062274 ECH
Lal5g1265 5 15379550 15383587 Lal3g0441 3 3058907 3062274 LSH
Lal3g0441 3 3058907 3062274 Lal18g1279 18 15387894 15391254 PCT
Lal3g0441 3 3058907 3062274 Lal22g0319 22 2024852 2028269 PCT
Lal18g1279 18 15387894 15391254 Lal3g0441 3 3058907 3062274 PCT
Lal22g0319 22 2024852 2028269 Lal3g0441 3 3058907 3062274 PCT