Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0436 ATGGGTAATAACAAGTTCAAGTTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTCAGAGATATGAGCAAATCAAAGAAGCAAAATGGTTCTTCTCATCATGTTATGAAGAGCAAAGTAACTTCACCAACAACATCACAAAGGTCACATCCAAGATACTCACATTATTTCTCCATTGAACCAAATAGAGTAGGTAAGTTATGCAACTCAACTATTTACACCAAATATTCAAACATGGCATTCATTGATTCACCAAGAAGGTCATCATCCAAGAAAAGGGCCATAAGAAAAACCATTTATAAGCCAAATCAAATTCAGTCTCCAAACTATCATGTTTCATCTATACAGATTTCGCCCGAGTCAAACCGCGATGAATATGATTCATCTGAGTCTGAGTATGATAAGTTTTCTGCTCCCAACTTGGTTAATAGGCTTAGCTCTTCAACTGATGATATCATCATTGACTTGAACAATGGTGAATCCTTAACTAGAAATTCTGAAAATCTAGATGGATTTCATACAATTTCACAGATAGGACTTGCTCCAATATTGACAAAACCAGTGAGGTTTGATGATAAGGCAATTGAAGCAACTAAGTTGAGGAGTTCAGCTAAATTGGATGAGCTACAGGCTCATCAATCTATACCTGTCAAAATAAGCAAAGGGTTAATCAGTAGAACTCAAAGAGAGCAAAAAGCCAGTTCTATAGCTCGAAAATCATCGGCTAATTCTACCGGTATAAGACTTAGAGTCAATTCTCCAAAACTTGCAAGAAGGAATGTGTCATCAAGTGCATGCAGGGCCACAAAAAATACAGGTTTACCAGAGGGCTTTGCTGTTTCTAAACCCTCTCTTGATCCTCAAAGAGACTTCAAGGACTCGATGTCGGAGATGATTAAGGAGAACAATATCCGGGCATCGAAAGATTTGGAGAACTTACTTGCCTGCTATCTTTCACTGAATTCAAGAGAATACCATTATCTCATTATCAAAGCATTTGAGCAAATTTGGTTTGACATGGCACAACTCAAATTGTAA 1041 0.3727 MGNNKFKLSDMMPNAWFYKLRDMSKSKKQNGSSHHVMKSKVTSPTTSQRSHPRYSHYFSIEPNRVGKLCNSTIYTKYSNMAFIDSPRRSSSKKRAIRKTIYKPNQIQSPNYHVSSIQISPESNRDEYDSSESEYDKFSAPNLVNRLSSSTDDIIIDLNNGESLTRNSENLDGFHTISQIGLAPILTKPVRFDDKAIEATKLRSSAKLDELQAHQSIPVKISKGLISRTQREQKASSIARKSSANSTGIRLRVNSPKLARRNVSSSACRATKNTGLPEGFAVSKPSLDPQRDFKDSMSEMIKENNIRASKDLENLLACYLSLNSREYHYLIIKAFEQIWFDMAQLKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0436 346 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 280 341 IPR006458 -
Lal3g0436 346 MobiDBLite consensus disorder prediction 35 54 - -
Lal3g0436 346 PANTHER TRANSCRIPTION REPRESSOR OFP3 3 345 - -
Lal3g0436 346 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 345 IPR038933 GO:0045892
Lal3g0436 346 ProSiteProfiles OVATE domain profile. 281 340 IPR006458 -
Lal3g0436 346 MobiDBLite consensus disorder prediction 27 54 - -
Lal3g0436 346 Pfam Transcriptional repressor, ovate 285 341 IPR006458 -
Lal3g0436 346 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0436 Lal-Chr3 3029722 3030762 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lal3g0436 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0436 - - lang:109340817 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0436 3 3029722 3030762 Lal3g0436 3 3029722 3030762 ECH
Lal3g0436 3 3029722 3030762 Lal18g1276 18 15366484 15367623 PCT
Lal3g0436 3 3029722 3030762 Lal22g0322 22 2040019 2041143 PCT
Lal18g1276 18 15366484 15367623 Lal3g0436 3 3029722 3030762 PCT
Lal22g0322 22 2040019 2041143 Lal3g0436 3 3029722 3030762 PCT