Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0426 ATGGATACCGCTGAATCCACACACAAACTAAATGAATTTTTGAATCCAAAATCTTACAGTGTTCGCGGTAAGATCATGCTTTCTTCCATCATCATCCTCTTCTTCGTCGTTATCTTAATGCTCCTCCTCCATCTCTACGCTCGCTGGTACCTCCTCCGCACTCGCCGTCGTTTCCTCCGCAACCGTAGTAGCAACCACCTCGTCTTCCACCTCGATTCCAATAACAGTAACAATAACAATAACAATCCAACCGCGCGTGGTCTCGACGCTTCCATCATCGCGTTGCTACCGATCTTCAATTATGACCCGAAAATAAATCCGGATAACCCGCCAGATTGCGCGGTTTGTTTATCTGAGTTTGAAGAAGGTGAAACGGGTCGGGTTTTACCGAAATGTAATCACGCGTTTCATACGGATTGTATTGATATGTGGTTTCACTCTCATTCCACTTGTCCTCTATGCCGTGCAGCGGTGGAGCTCACACAAGGAGGAAAAGATAATCACGAAGCTGATGTTGTTGTTATTGATATTTGTGAACCGGAATCCGGTTCTGGTTCTGATCAAAACCGAACCGGTTTTGAAGTTTGTTCGTTAGTGAGAGGGAAACCTTCTGTGATGATTGAGATTCCTTCGATTGATGAATCGGGTTTGGTTTGTGACTCGCCTTCTACGTCGTCGTTTCGATCACCGATGACTCGGGTGCTGTCGTTACTTAGTAGGGAGCGGAGAGAAAGCGTTTCGCCGTCTTCGGGTTGTGGTGGTTGCAGCAACTTTGGTGGTGAGTTGAACGCTGAGCGAGGTGGGGAAGAAGAGAATCGGCTTGTAAAAATAGTAAAATATAATAATAATTTACCCCTTGGATGGTCTGGCTCCTCTCCTGTAATGGAGAGGCGACAGGAGAGGCCAGTGAGTCCTCATATTGTGACACGTGTAATAAAAAAATGGACGGCTGAGATTTAA 960 0.4604 MDTAESTHKLNEFLNPKSYSVRGKIMLSSIIILFFVVILMLLLHLYARWYLLRTRRRFLRNRSSNHLVFHLDSNNSNNNNNNPTARGLDASIIALLPIFNYDPKINPDNPPDCAVCLSEFEEGETGRVLPKCNHAFHTDCIDMWFHSHSTCPLCRAAVELTQGGKDNHEADVVVIDICEPESGSGSDQNRTGFEVCSLVRGKPSVMIEIPSIDESGLVCDSPSTSSFRSPMTRVLSLLSRERRESVSPSSGCGGCSNFGGELNAERGGEEENRLVKIVKYNNNLPLGWSGSSPVMERRQERPVSPHIVTRVIKKWTAEI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0426 319 PANTHER RING-H2 FINGER PROTEIN ATL64 1 166 - -
Lal3g0426 319 CDD RING-H2_PA-TM-RING 112 155 - -
Lal3g0426 319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 163 IPR013083 -
Lal3g0426 319 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Lal3g0426 319 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 166 - -
Lal3g0426 319 SUPERFAMILY RING/U-box 112 163 - -
Lal3g0426 319 SMART ring_2 113 154 IPR001841 -
Lal3g0426 319 Pfam Ring finger domain 112 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0426 Lal-Chr3 2946494 2947744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0426 11 270 Rapid Response to Elicitors AT3G16720 46.713 2.62e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0426 - - lja:Lj6g3v1468220.1 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0426 3 2946494 2947744 Lal3g0426 3 2946494 2947744 ECH