Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g0425 ATGGCTGGTTCTGTAGGAGAGAATGTGCAAGATAAGAAGAAAAGGTATGTCATTGTTAGTATCTCTTCATTCCTTCTAGTTGCTATGGTTGGTGTGGTGGCTGTTGGTTTAACCGGAAGTGAGAGCCCGGATCACGGTTCGACCGAGATCTCGAGCTCTCAGAGGAATGCAGAGATGCTCTGCCAATCTACACAATACAAAGATACTTGCATCAAAAGCTTCGATAATGCGTCGACCACGACCGATGTGAAAGAGCTTGTGAAAATAGCTTTCAATTCCACAGCTAAGGAGTTGTTAAGCAAAATGAATAACTCTACTCTTTTTGAAGAGTTGGCTAAGGATAACATGACCAAGCAGGCCTTAGATATATGCAAGGAAGTGCTTGATTATGCAGTTGATGACATTCAGAAATCAATTAACTCATTGGATAGTTTTGAAGTAAACAAGTTAAACCAATATGCCTATGACCTTAAGATTTGGATTGCAGGCACATTGTCACACCAACAAACATGTTTGGCTGGATTCGAAAACTCGAAAACAAAAGCCGGTTTGACAATGGCTAAGGCTCTTAACACTTCACTTGAGCTAAGTAGCAATGCAATTGATCTCATAAATGCTGCATCTGAACTCCTTAAGGGTCTTAACTTGAACTCCTCTGAGCTTATTAGTAAAATTGCTAGCAGGAGGCTTCTCTCTGAGGAACAACAACCACTAGTTGATGGTTTTCCTTCATGGGTGAGTGATGGACAGCGGCGCCTTCTTCAGGCAGCAACCGGTGGTGGTGGCGGCATTAAGGCTAATGCAGTTGTGGCTAAAGATGGGAGTGGACAGTTCAAAACACTCACTGATGCTCTTCAAACTGTTCCAAAGAAAAATGTTGTGCCTTTTGTGATTCATGTTAAGGAGGGTGTGTACAATGAGTATGTTATTCTGACCAAACATATGACTAATGTCACAATCATTGGAGATGGTCCTACAAAGACAATATTCACTGGCAGCAAAAATTACAAAGATGGTGTCCAAACTTACAACACTGCAACCTTTGGTGTTAATGCTGCTAACTTCATTGCCAAGGACATTGGTTTTGAGAACACAGCAGGATCAGAGAAGCACCAAGCTGTGGCACTCAGGGTAACAGCTGACCAAGCAGTGTTCCACAACTGCAAAATGGATGGATTCCAAGACACTCTATATGTCCAATCTAAACGCCAATTCTACCGTGACTGCACCGTCTCAGGCACCATAGACTTCATCTTCGGGGACGGAGTCGCGGTGTTCCAGAACTGCAAGCTTATAGTAAGAAAACCCTTACAAAACCAACAATGCATGGTTACAGCAGGTGGAAGATCAAAGCTTGAAAGCCCTAGTGGTCTAATTTTCCAAAACTGTCACTTCACAAGTGAGCCAGAAGTAGCTACCTTGAACCCCAAGATATCATATTTGGGAAGACCATGGAGGATTTACTCTAGAGTTGTTATCATGGATTCTACAATTGATGACATTTTTGTCCCTGAAGGGTATATGCCATGGATGGGAAGTGCATTCACAGAAACATGTACCTATTTTGAGTACAATAACAAAGGTGGTGGTGCTAACACTGCAGCAAGAGTGAAATGGCCTGGTGTTAAGACCATAACATCTGCTGAAGCTGCTGTTTTCTATCCAGGGAAGTTCTACGAAATCGCGAACTCGACTGAACGCGATTCTTGGATTACAAGCTCTGGCATACCGTATTCATTAGGCCCCATTCCAAACACCAATGCTGCAACACAATAG 1776 0.4279 MAGSVGENVQDKKKRYVIVSISSFLLVAMVGVVAVGLTGSESPDHGSTEISSSQRNAEMLCQSTQYKDTCIKSFDNASTTTDVKELVKIAFNSTAKELLSKMNNSTLFEELAKDNMTKQALDICKEVLDYAVDDIQKSINSLDSFEVNKLNQYAYDLKIWIAGTLSHQQTCLAGFENSKTKAGLTMAKALNTSLELSSNAIDLINAASELLKGLNLNSSELISKIASRRLLSEEQQPLVDGFPSWVSDGQRRLLQAATGGGGGIKANAVVAKDGSGQFKTLTDALQTVPKKNVVPFVIHVKEGVYNEYVILTKHMTNVTIIGDGPTKTIFTGSKNYKDGVQTYNTATFGVNAANFIAKDIGFENTAGSEKHQAVALRVTADQAVFHNCKMDGFQDTLYVQSKRQFYRDCTVSGTIDFIFGDGVAVFQNCKLIVRKPLQNQQCMVTAGGRSKLESPSGLIFQNCHFTSEPEVATLNPKISYLGRPWRIYSRVVIMDSTIDDIFVPEGYMPWMGSAFTETCTYFEYNNKGGGANTAARVKWPGVKTITSAEAAVFYPGKFYEIANSTERDSWITSSGIPYSLGPIPNTNAATQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g0425 591 Pfam Plant invertase/pectin methylesterase inhibitor 60 202 IPR006501 GO:0004857
Lal3g0425 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 207 IPR035513 -
Lal3g0425 591 ProSitePatterns Pectinesterase signature 1. 292 311 IPR018040 -
Lal3g0425 591 Gene3D - 262 581 IPR012334 -
Lal3g0425 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 206 IPR035513 -
Lal3g0425 591 CDD PMEI-like_3 60 208 - -
Lal3g0425 591 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Lal3g0425 591 PANTHER PECTINESTERASE 9 586 - -
Lal3g0425 591 Pfam Pectinesterase 267 558 IPR000070 GO:0030599|GO:0042545
Lal3g0425 591 PANTHER PECTINESTERASE 9 586 - -
Lal3g0425 591 SMART PMEI_2 52 203 IPR006501 GO:0004857
Lal3g0425 591 SUPERFAMILY Pectin lyase-like 264 580 IPR011050 -
Lal3g0425 591 TIGRFAM PME_inhib: pectinesterase inhibitor domain 44 205 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g0425 Lal-Chr3 2939700 2941736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g0425 12 589 Carbohydrate Esterase AT3G05610 45.189 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g0425 K01051 - gmx:100820068 793.497